Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NEK1Q96PY6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.39■□□□□ 0.53
NEK1Q96PY6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 GHSR-202ENST00000427970 912 ntBASIC18.38■□□□□ 0.53
NEK1Q96PY6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 AL645728.2-202ENST00000641679 227 ntBASIC18.38■□□□□ 0.53
NEK1Q96PY6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 CLK3P2-201ENST00000427566 1453 ntBASIC18.38■□□□□ 0.53
NEK1Q96PY6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NEK1Q96PY6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NEK1Q96PY6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 RNA5SP421-201ENST00000516864 134 ntBASIC18.37■□□□□ 0.53
NEK1Q96PY6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.37■□□□□ 0.53
NEK1Q96PY6 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.37■□□□□ 0.53
NEK1Q96PY6 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.37■□□□□ 0.53
NEK1Q96PY6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.37■□□□□ 0.53
NEK1Q96PY6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.37■□□□□ 0.53
NEK1Q96PY6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NEK1Q96PY6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.36■□□□□ 0.53
NEK1Q96PY6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NEK1Q96PY6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms