Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 E2F3P2-201ENST00000447755 1422 ntBASIC17.89■□□□□ 0.45
CDCA5Q96FF9 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.89■□□□□ 0.45
CDCA5Q96FF9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 RN7SKP175-201ENST00000408472 289 ntBASIC17.88■□□□□ 0.45
CDCA5Q96FF9 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.88■□□□□ 0.45
CDCA5Q96FF9 HLA-K-203ENST00000430151 1046 ntBASIC17.88■□□□□ 0.45
CDCA5Q96FF9 KRT18P66-201ENST00000452970 1269 ntBASIC17.88■□□□□ 0.45
CDCA5Q96FF9 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 AP001065.2-201ENST00000617205 644 ntBASIC17.88■□□□□ 0.45
CDCA5Q96FF9 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 AL645728.2-202ENST00000641679 227 ntBASIC17.88■□□□□ 0.45
CDCA5Q96FF9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.88■□□□□ 0.45
CDCA5Q96FF9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 AC009779.1-201ENST00000551138 283 ntBASIC17.87■□□□□ 0.45
CDCA5Q96FF9 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 AC132192.2-201ENST00000596206 1147 ntBASIC17.87■□□□□ 0.45
CDCA5Q96FF9 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDCA5Q96FF9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 SHC1P1-201ENST00000425230 1745 ntBASIC17.86■□□□□ 0.45
CDCA5Q96FF9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 AC026434.2-201ENST00000506094 1078 ntBASIC17.86■□□□□ 0.45
CDCA5Q96FF9 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.86■□□□□ 0.45
CDCA5Q96FF9 DUX4L46-201ENST00000566845 751 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms