Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
DDX1Q92499 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DDX1Q92499 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DDX1Q92499 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DDX1Q92499 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.52■□□□□ 0.23
DDX1Q92499 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.52■□□□□ 0.23
DDX1Q92499 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
DDX1Q92499 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
DDX1Q92499 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
DDX1Q92499 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.52■□□□□ 0.23
DDX1Q92499 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.52■□□□□ 0.23
DDX1Q92499 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.51■□□□□ 0.23
DDX1Q92499 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
DDX1Q92499 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.51■□□□□ 0.23
DDX1Q92499 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 AP000845.1-201ENST00000581677 2131 ntBASIC16.51■□□□□ 0.23
DDX1Q92499 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
DDX1Q92499 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.51■□□□□ 0.23
DDX1Q92499 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
DDX1Q92499 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
DDX1Q92499 AL512384.1-201ENST00000406683 331 ntBASIC16.51■□□□□ 0.23
DDX1Q92499 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.51■□□□□ 0.23
DDX1Q92499 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
DDX1Q92499 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
DDX1Q92499 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.51■□□□□ 0.23
DDX1Q92499 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.51■□□□□ 0.23
DDX1Q92499 FAM8A2P-201ENST00000528813 1142 ntBASIC16.51■□□□□ 0.23
DDX1Q92499 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.51■□□□□ 0.23
DDX1Q92499 SRD5A3P1-201ENST00000603021 949 ntBASIC16.51■□□□□ 0.23
DDX1Q92499 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.51■□□□□ 0.23
DDX1Q92499 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.51■□□□□ 0.23
DDX1Q92499 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.51■□□□□ 0.23
DDX1Q92499 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.51■□□□□ 0.23
DDX1Q92499 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
DDX1Q92499 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DDX1Q92499 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
DDX1Q92499 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
DDX1Q92499 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.5■□□□□ 0.23
DDX1Q92499 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 MIR658-201ENST00000385210 100 ntBASIC16.5■□□□□ 0.23
DDX1Q92499 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.5■□□□□ 0.23
DDX1Q92499 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
DDX1Q92499 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.5■□□□□ 0.23
DDX1Q92499 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.5■□□□□ 0.23
DDX1Q92499 RN7SL752P-201ENST00000463779 287 ntBASIC16.5■□□□□ 0.23
DDX1Q92499 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.5■□□□□ 0.23
DDX1Q92499 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.5■□□□□ 0.23
DDX1Q92499 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 TIMM17BP1-201ENST00000545713 516 ntBASIC16.5■□□□□ 0.23
DDX1Q92499 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 RAB43P1-201ENST00000561790 589 ntBASIC16.5■□□□□ 0.23
DDX1Q92499 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.5■□□□□ 0.23
DDX1Q92499 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.5■□□□□ 0.23
DDX1Q92499 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
DDX1Q92499 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms