Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
SLC44A1Q8WWI5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 KRT18P58-201ENST00000527480 1120 ntBASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 ALG1L8P-201ENST00000533887 760 ntBASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 AC023511.2-201ENST00000618803 211 ntBASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 AC139749.1-202ENST00000617529 3139 ntBASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 PCDHA3-202ENST00000532566 4594 ntBASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC44A1Q8WWI5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SLC44A1Q8WWI5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC44A1Q8WWI5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SLC44A1Q8WWI5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SLC44A1Q8WWI5 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC44A1Q8WWI5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.09
SLC44A1Q8WWI5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SLC44A1Q8WWI5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 AC040169.1-201ENST00000565382 521 ntBASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 AL133215.2-201ENST00000609242 977 ntBASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 AC018529.1-201ENST00000613063 361 ntBASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 MTHFR-210ENST00000641407 2387 ntBASIC15.58■□□□□ 0.08
SLC44A1Q8WWI5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms