Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 AZGP1P1-201ENST00000411909 902 ntBASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 DNAJB3-201ENST00000446806 729 ntBASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN22Q8N7P3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 RPSAP43-201ENST00000402237 625 ntBASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 AL627223.1-201ENST00000416693 442 ntBASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 BX842568.4-201ENST00000421222 227 ntBASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 KRT18P32-201ENST00000424695 1287 ntBASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN22Q8N7P3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN22Q8N7P3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN22Q8N7P3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.21□□□□□ -0.14
CLDN22Q8N7P3 AC084364.1-201ENST00000551967 1556 ntBASIC14.21□□□□□ -0.14
CLDN22Q8N7P3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN22Q8N7P3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN22Q8N7P3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN22Q8N7P3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
CLDN22Q8N7P3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 AJ011931.1-201ENST00000618749 2492 ntBASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms