Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 C18orf15-201ENST00000623680 2534 ntBASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AC126365.1-201ENST00000578585 1514 ntBASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 TREML5P-201ENST00000421694 576 ntBASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AC092580.3-201ENST00000430932 139 ntBASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AC006538.3-201ENST00000612495 578 ntBASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AL590560.3-201ENST00000623350 461 ntBASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AC006486.2-201ENST00000624246 2199 ntBASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TTC9CQ8N5M4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.33□□□□□ -0.43
TTC9CQ8N5M4 DBET-201ENST00000630918 3363 ntBASIC12.33□□□□□ -0.43
TTC9CQ8N5M4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.33□□□□□ -0.43
TTC9CQ8N5M4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AL133267.1-201ENST00000398220 340 ntBASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 MIR943-201ENST00000401286 94 ntBASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AC015922.1-201ENST00000421102 1152 ntBASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 RPL13P2-201ENST00000440687 659 ntBASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AC100757.3-201ENST00000622361 1406 ntBASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 AC084364.1-201ENST00000551967 1556 ntBASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TTC9CQ8N5M4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms