Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC013553.1-201ENST00000560906 267 ntBASIC20.74■□□□□ 0.91
LTBP4Q8N2S1 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LTBP4Q8N2S1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LTBP4Q8N2S1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LTBP4Q8N2S1 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC20.74■□□□□ 0.91
LTBP4Q8N2S1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LTBP4Q8N2S1 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 GEMIN8P4-201ENST00000380526 729 ntBASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 OR5BD1P-201ENST00000532527 817 ntBASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 F11R-204ENST00000537746 1245 ntTSL 2 BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 API5-208ENST00000531273 1868 ntTSL 2 BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 AC078925.2-201ENST00000624013 1973 ntBASIC20.73■□□□□ 0.91
LTBP4Q8N2S1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 GGTLC4P-201ENST00000402176 664 ntBASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 DUX4L50-201ENST00000455245 715 ntBASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 NF1P11-201ENST00000621292 1282 ntBASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 AL136172.1-201ENST00000598590 1394 ntBASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LTBP4Q8N2S1 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 BX088651.3-201ENST00000418155 352 ntBASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 AC006529.1-201ENST00000459978 637 ntBASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 AC092896.1-201ENST00000465850 380 ntBASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 AC006986.1-201ENST00000612764 241 ntBASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 RN7SL602P-201ENST00000578326 324 ntBASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 RN7SL718P-201ENST00000581254 303 ntBASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 ST5-261ENST00000626808 1071 ntTSL 5 BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LTBP4Q8N2S1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 AC008536.3-201ENST00000623282 1599 ntBASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LTBP4Q8N2S1 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms