Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
COL23A1Q86Y22 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL23A1Q86Y22 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL23A1Q86Y22 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL23A1Q86Y22 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL23A1Q86Y22 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 INE2-201ENST00000630399 1874 ntBASIC19.14■□□□□ 0.65
COL23A1Q86Y22 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 AC009093.2-202ENST00000620513 2079 ntBASIC19.14■□□□□ 0.65
COL23A1Q86Y22 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 RBM8B-201ENST00000555532 525 ntBASIC19.14■□□□□ 0.65
COL23A1Q86Y22 AC008805.1-201ENST00000590892 364 ntBASIC19.14■□□□□ 0.65
COL23A1Q86Y22 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL23A1Q86Y22 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 AC239868.1-201ENST00000369385 493 ntBASIC19.13■□□□□ 0.65
COL23A1Q86Y22 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 AC010141.1-201ENST00000411585 623 ntBASIC19.13■□□□□ 0.65
COL23A1Q86Y22 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 RN7SL258P-201ENST00000478664 300 ntBASIC19.13■□□□□ 0.65
COL23A1Q86Y22 AC026434.2-201ENST00000506094 1078 ntBASIC19.13■□□□□ 0.65
COL23A1Q86Y22 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 AL031713.1-201ENST00000564813 661 ntBASIC19.13■□□□□ 0.65
COL23A1Q86Y22 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 FAM90A7P-201ENST00000382628 1395 ntBASIC19.13■□□□□ 0.65
COL23A1Q86Y22 FAM90A23P-201ENST00000400136 1395 ntBASIC19.13■□□□□ 0.65
COL23A1Q86Y22 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.13■□□□□ 0.65
COL23A1Q86Y22 MBLAC2-202ENST00000514906 1936 ntBASIC19.13■□□□□ 0.65
COL23A1Q86Y22 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC090340.1-201ENST00000620778 4980 ntBASIC19.12■□□□□ 0.65
COL23A1Q86Y22 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC084364.1-201ENST00000551967 1556 ntBASIC19.12■□□□□ 0.65
COL23A1Q86Y22 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 RPL8P2-201ENST00000430538 502 ntBASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC012362.1-201ENST00000434906 739 ntBASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC079112.1-201ENST00000454972 939 ntBASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC010234.1-201ENST00000494599 870 ntBASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.12■□□□□ 0.65
COL23A1Q86Y22 RPL17P45-201ENST00000586289 509 ntBASIC19.12■□□□□ 0.65
COL23A1Q86Y22 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms