Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 AC243562.1-201ENST00000560672 389 ntBASIC14.46□□□□□ -0.09
TUBA1AQ71U36 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TUBA1AQ71U36 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.46□□□□□ -0.1
TUBA1AQ71U36 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1AQ71U36 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1AQ71U36 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1AQ71U36 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1AQ71U36 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.46□□□□□ -0.1
TUBA1AQ71U36 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TUBA1AQ71U36 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1AQ71U36 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TUBA1AQ71U36 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 AL592309.1-201ENST00000443127 649 ntBASIC14.45□□□□□ -0.1
TUBA1AQ71U36 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 FAM86C2P-203ENST00000528684 1004 ntBASIC14.45□□□□□ -0.1
TUBA1AQ71U36 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
TUBA1AQ71U36 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 AC010327.5-201ENST00000586923 3061 ntBASIC14.44□□□□□ -0.1
TUBA1AQ71U36 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 AC005237.2-201ENST00000434368 219 ntBASIC14.44□□□□□ -0.1
TUBA1AQ71U36 SPCS2P4-201ENST00000436160 681 ntBASIC14.44□□□□□ -0.1
TUBA1AQ71U36 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 AP006288.1-201ENST00000446065 395 ntBASIC14.44□□□□□ -0.1
TUBA1AQ71U36 RN7SL589P-201ENST00000481268 310 ntBASIC14.44□□□□□ -0.1
TUBA1AQ71U36 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.44□□□□□ -0.1
TUBA1AQ71U36 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms