Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC141Q6ZP82 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC141Q6ZP82 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC22.68■■□□□ 1.22
CCDC141Q6ZP82 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CCDC141Q6ZP82 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC141Q6ZP82 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC22.68■■□□□ 1.22
CCDC141Q6ZP82 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 NME2-201ENST00000393183 568 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 AC100827.2-201ENST00000563214 1194 ntBASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CCDC141Q6ZP82 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 UFM1-202ENST00000379649 846 ntTSL 4 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 PES1-204ENST00000402284 2144 ntTSL 5 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 FTLP1-201ENST00000449155 526 ntBASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 EEF1DP6-201ENST00000449232 372 ntBASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 HLA-J-204ENST00000495278 958 ntBASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 DUX4L46-201ENST00000566845 751 ntBASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 RN7SL163P-201ENST00000583100 276 ntBASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 CICP11-201ENST00000434745 2827 ntBASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 AK6-201ENST00000380818 1183 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 Z97180.1-201ENST00000445173 988 ntBASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 AC234782.1-201ENST00000451950 919 ntBASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 Z98259.2-201ENST00000641583 609 ntBASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC22.66■■□□□ 1.22
CCDC141Q6ZP82 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 MPRIPP1-201ENST00000452433 1089 ntBASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 AC104073.2-201ENST00000453737 312 ntBASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 CEP164P1-201ENST00000455142 418 ntBASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 MIR4754-201ENST00000582477 89 ntBASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 AL353770.1-201ENST00000614915 403 ntBASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC141Q6ZP82 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms