Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 AC004899.1-201ENST00000424687 1714 ntBASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 AP000593.2-201ENST00000542775 1433 ntBASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 AL596276.2-201ENST00000447525 331 ntBASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 AC104073.2-201ENST00000453737 312 ntBASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 MARK2P5-201ENST00000507649 634 ntBASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 MIR7845-201ENST00000618396 99 ntBASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CNKSR3Q6P9H4 FKBP4P6-201ENST00000457486 1332 ntBASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 HLA-K-203ENST00000430151 1046 ntBASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AC005324.6-201ENST00000587972 613 ntBASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AL136295.7-201ENST00000619226 1200 ntBASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AL162426.1-201ENST00000624141 743 ntBASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AC068587.8-201ENST00000641239 219 ntBASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 AC127383.1-201ENST00000444697 1800 ntBASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CNKSR3Q6P9H4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms