Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ATPAF1Q5TC12 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.58□□□□□ -0.23
ATPAF1Q5TC12 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.58□□□□□ -0.23
ATPAF1Q5TC12 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ATPAF1Q5TC12 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ATPAF1Q5TC12 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.58□□□□□ -0.23
ATPAF1Q5TC12 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AC005912.2-201ENST00000619492 2400 ntBASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 HAUS4P1-201ENST00000406739 1145 ntBASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 GPS2P2-201ENST00000430745 888 ntBASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 RARRES2P9-201ENST00000565168 469 ntBASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AP001059.3-201ENST00000619053 235 ntBASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AC092127.1-201ENST00000567093 3455 ntBASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 AC011477.6-201ENST00000604980 1927 ntBASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ATPAF1Q5TC12 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 RPS8P6-201ENST00000426177 609 ntBASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 RBPMS2P1-201ENST00000437762 623 ntBASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 AC027612.4-201ENST00000605371 583 ntBASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ATPAF1Q5TC12 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms