Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC27Q2M243 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC27Q2M243 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC27Q2M243 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 ACKR1-201ENST00000368121 1240 ntBASIC20.11■□□□□ 0.81
CCDC27Q2M243 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 HLA-K-203ENST00000430151 1046 ntBASIC20.11■□□□□ 0.81
CCDC27Q2M243 AL162726.2-201ENST00000438986 1017 ntBASIC20.11■□□□□ 0.81
CCDC27Q2M243 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC27Q2M243 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC27Q2M243 REXO1L2P-201ENST00000425429 2069 ntBASIC20.11■□□□□ 0.81
CCDC27Q2M243 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 AC098614.1-201ENST00000368528 745 ntBASIC20.1■□□□□ 0.81
CCDC27Q2M243 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 BX539320.1-201ENST00000623759 877 ntBASIC20.1■□□□□ 0.81
CCDC27Q2M243 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.1■□□□□ 0.81
CCDC27Q2M243 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC27Q2M243 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC27Q2M243 TCAF2P1-201ENST00000291129 2421 ntBASIC20.1■□□□□ 0.81
CCDC27Q2M243 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 AL033527.5-201ENST00000641382 801 ntBASIC20.09■□□□□ 0.81
CCDC27Q2M243 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC27Q2M243 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC27Q2M243 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms