Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 SAMD11P1-201ENST00000571429 661 ntBASIC17.22■□□□□ 0.35
ECM1Q16610 CLUHP6-201ENST00000580789 941 ntBASIC17.22■□□□□ 0.35
ECM1Q16610 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.22■□□□□ 0.35
ECM1Q16610 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.22■□□□□ 0.35
ECM1Q16610 AC005252.2-201ENST00000624630 1141 ntBASIC17.22■□□□□ 0.35
ECM1Q16610 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.22■□□□□ 0.35
ECM1Q16610 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECM1Q16610 AP002414.2-201ENST00000591780 3365 ntBASIC17.22■□□□□ 0.35
ECM1Q16610 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECM1Q16610 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECM1Q16610 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECM1Q16610 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECM1Q16610 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECM1Q16610 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECM1Q16610 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ECM1Q16610 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ECM1Q16610 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ECM1Q16610 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.21■□□□□ 0.35
ECM1Q16610 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.21■□□□□ 0.35
ECM1Q16610 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.21■□□□□ 0.35
ECM1Q16610 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.21■□□□□ 0.35
ECM1Q16610 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 AL596325.1-201ENST00000563991 1082 ntBASIC17.21■□□□□ 0.35
ECM1Q16610 AC133539.2-201ENST00000604757 467 ntBASIC17.21■□□□□ 0.35
ECM1Q16610 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.21■□□□□ 0.35
ECM1Q16610 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ECM1Q16610 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.21■□□□□ 0.35
ECM1Q16610 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.21■□□□□ 0.35
ECM1Q16610 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.21■□□□□ 0.35
ECM1Q16610 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ECM1Q16610 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ECM1Q16610 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ECM1Q16610 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.21■□□□□ 0.35
ECM1Q16610 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
ECM1Q16610 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.21■□□□□ 0.34
ECM1Q16610 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ECM1Q16610 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
ECM1Q16610 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.2■□□□□ 0.34
ECM1Q16610 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ECM1Q16610 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.2■□□□□ 0.34
ECM1Q16610 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.2■□□□□ 0.34
ECM1Q16610 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ECM1Q16610 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ECM1Q16610 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.2■□□□□ 0.34
ECM1Q16610 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.2■□□□□ 0.34
ECM1Q16610 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.2■□□□□ 0.34
ECM1Q16610 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.2■□□□□ 0.34
ECM1Q16610 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.2■□□□□ 0.34
ECM1Q16610 RPL13AP25-201ENST00000484130 612 ntBASIC17.2■□□□□ 0.34
ECM1Q16610 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.2■□□□□ 0.34
ECM1Q16610 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ECM1Q16610 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ECM1Q16610 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.2■□□□□ 0.34
ECM1Q16610 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.2■□□□□ 0.34
ECM1Q16610 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.2■□□□□ 0.34
ECM1Q16610 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ECM1Q16610 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms