Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19■□□□□ 0.63
DDR1Q08345 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDR1Q08345 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDR1Q08345 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDR1Q08345 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDR1Q08345 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19■□□□□ 0.63
DDR1Q08345 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
DDR1Q08345 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDR1Q08345 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
DDR1Q08345 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDR1Q08345 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
DDR1Q08345 FKBP4P6-201ENST00000457486 1332 ntBASIC19■□□□□ 0.63
DDR1Q08345 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.99■□□□□ 0.63
DDR1Q08345 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.99■□□□□ 0.63
DDR1Q08345 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.99■□□□□ 0.63
DDR1Q08345 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 AC026316.1-201ENST00000398900 414 ntBASIC18.99■□□□□ 0.63
DDR1Q08345 RN7SKP175-201ENST00000408472 289 ntBASIC18.99■□□□□ 0.63
DDR1Q08345 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 RPL13AP19-201ENST00000434320 584 ntBASIC18.99■□□□□ 0.63
DDR1Q08345 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.99■□□□□ 0.63
DDR1Q08345 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.99■□□□□ 0.63
DDR1Q08345 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
DDR1Q08345 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.99■□□□□ 0.63
DDR1Q08345 AC103691.2-201ENST00000618824 433 ntBASIC18.99■□□□□ 0.63
DDR1Q08345 HLA-C-210ENST00000640219 976 ntBASIC18.99■□□□□ 0.63
DDR1Q08345 AL645728.2-202ENST00000641679 227 ntBASIC18.99■□□□□ 0.63
DDR1Q08345 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.99■□□□□ 0.63
DDR1Q08345 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
DDR1Q08345 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
DDR1Q08345 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 AC009093.2-202ENST00000620513 2079 ntBASIC18.99■□□□□ 0.63
DDR1Q08345 E2F3P2-201ENST00000447755 1422 ntBASIC18.99■□□□□ 0.63
DDR1Q08345 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDR1Q08345 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.99■□□□□ 0.63
DDR1Q08345 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.98■□□□□ 0.63
DDR1Q08345 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.98■□□□□ 0.63
DDR1Q08345 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.98■□□□□ 0.63
DDR1Q08345 REXO1L5P-201ENST00000622260 2098 ntBASIC18.98■□□□□ 0.63
DDR1Q08345 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 NOC2LP1-201ENST00000450578 752 ntBASIC18.98■□□□□ 0.63
DDR1Q08345 AL353637.1-201ENST00000451571 732 ntBASIC18.98■□□□□ 0.63
DDR1Q08345 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.98■□□□□ 0.63
DDR1Q08345 AC100827.2-201ENST00000563214 1194 ntBASIC18.98■□□□□ 0.63
DDR1Q08345 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.98■□□□□ 0.63
DDR1Q08345 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.98■□□□□ 0.63
DDR1Q08345 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
DDR1Q08345 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.98■□□□□ 0.63
DDR1Q08345 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
DDR1Q08345 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.98■□□□□ 0.63
DDR1Q08345 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDR1Q08345 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.97■□□□□ 0.63
DDR1Q08345 INE2-201ENST00000630399 1874 ntBASIC18.97■□□□□ 0.63
DDR1Q08345 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDR1Q08345 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms