Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COL16A1Q07092 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC20.24■□□□□ 0.83
COL16A1Q07092 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC20.24■□□□□ 0.83
COL16A1Q07092 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC20.24■□□□□ 0.83
COL16A1Q07092 SKA2-202ENST00000437036 625 ntTSL 2 BASIC20.24■□□□□ 0.83
COL16A1Q07092 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC20.24■□□□□ 0.83
COL16A1Q07092 ALG3P1-201ENST00000508806 1114 ntBASIC20.24■□□□□ 0.83
COL16A1Q07092 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COL16A1Q07092 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC20.24■□□□□ 0.83
COL16A1Q07092 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
COL16A1Q07092 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC20.23■□□□□ 0.83
COL16A1Q07092 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.23■□□□□ 0.83
COL16A1Q07092 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
COL16A1Q07092 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.23■□□□□ 0.83
COL16A1Q07092 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC20.23■□□□□ 0.83
COL16A1Q07092 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL16A1Q07092 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.23■□□□□ 0.83
COL16A1Q07092 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC20.23■□□□□ 0.83
COL16A1Q07092 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL16A1Q07092 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL16A1Q07092 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.22■□□□□ 0.83
COL16A1Q07092 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.22■□□□□ 0.83
COL16A1Q07092 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL16A1Q07092 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL16A1Q07092 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.22■□□□□ 0.83
COL16A1Q07092 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC20.22■□□□□ 0.83
COL16A1Q07092 OR2R1P-201ENST00000441404 914 ntBASIC20.22■□□□□ 0.83
COL16A1Q07092 AC138701.2-201ENST00000553634 226 ntBASIC20.22■□□□□ 0.83
COL16A1Q07092 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.22■□□□□ 0.83
COL16A1Q07092 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC20.22■□□□□ 0.83
COL16A1Q07092 AC021016.3-201ENST00000608367 477 ntBASIC20.22■□□□□ 0.83
COL16A1Q07092 AP000322.3-201ENST00000608665 388 ntBASIC20.22■□□□□ 0.83
COL16A1Q07092 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC20.22■□□□□ 0.83
COL16A1Q07092 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COL16A1Q07092 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL16A1Q07092 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.22■□□□□ 0.83
COL16A1Q07092 AC018695.7-201ENST00000624587 2492 ntBASIC20.22■□□□□ 0.83
COL16A1Q07092 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
COL16A1Q07092 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.22■□□□□ 0.83
COL16A1Q07092 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL16A1Q07092 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL16A1Q07092 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.22■□□□□ 0.83
COL16A1Q07092 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.22■□□□□ 0.83
COL16A1Q07092 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
COL16A1Q07092 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
COL16A1Q07092 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
COL16A1Q07092 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COL16A1Q07092 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL16A1Q07092 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 RN7SL494P-201ENST00000461517 304 ntBASIC20.21■□□□□ 0.83
COL16A1Q07092 CISD2-202ENST00000503643 808 ntTSL 2 BASIC20.21■□□□□ 0.83
COL16A1Q07092 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
COL16A1Q07092 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC20.21■□□□□ 0.83
COL16A1Q07092 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC20.21■□□□□ 0.83
COL16A1Q07092 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
COL16A1Q07092 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL16A1Q07092 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.21■□□□□ 0.83
COL16A1Q07092 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COL16A1Q07092 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
COL16A1Q07092 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.21■□□□□ 0.83
COL16A1Q07092 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL16A1Q07092 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
COL16A1Q07092 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC20.2■□□□□ 0.82
COL16A1Q07092 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL16A1Q07092 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC20.2■□□□□ 0.82
COL16A1Q07092 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms