Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 AC011474.4-201ENST00000623523 2076 ntBASIC13.19□□□□□ -0.3
SSBP1Q04837 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 AL136982.4-201ENST00000437689 1740 ntBASIC13.19□□□□□ -0.3
SSBP1Q04837 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SSBP1Q04837 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSBP1Q04837 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 LINC01230-201ENST00000625222 3017 ntBASIC13.18□□□□□ -0.3
SSBP1Q04837 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.18□□□□□ -0.3
SSBP1Q04837 AC055811.4-201ENST00000624039 1754 ntBASIC13.18□□□□□ -0.3
SSBP1Q04837 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SSBP1Q04837 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
SSBP1Q04837 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP1Q04837 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.18□□□□□ -0.3
SSBP1Q04837 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP1Q04837 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.18□□□□□ -0.3
SSBP1Q04837 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
SSBP1Q04837 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP1Q04837 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.18□□□□□ -0.3
SSBP1Q04837 MIR4751-201ENST00000578027 74 ntBASIC13.18□□□□□ -0.3
SSBP1Q04837 AC007064.4-201ENST00000637740 555 ntBASIC13.18□□□□□ -0.3
SSBP1Q04837 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP1Q04837 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSBP1Q04837 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 CYP4F24P-201ENST00000586049 1580 ntBASIC13.18□□□□□ -0.3
SSBP1Q04837 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 AC087386.2-201ENST00000623212 4637 ntBASIC13.18□□□□□ -0.3
SSBP1Q04837 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SSBP1Q04837 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SSBP1Q04837 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP1Q04837 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSBP1Q04837 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP1Q04837 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 AC117489.1-201ENST00000625169 3217 ntBASIC13.17□□□□□ -0.3
SSBP1Q04837 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SSBP1Q04837 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
SSBP1Q04837 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP1Q04837 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.17□□□□□ -0.3
SSBP1Q04837 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.17□□□□□ -0.3
SSBP1Q04837 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
SSBP1Q04837 CLEC4GP1-201ENST00000596555 870 ntBASIC13.17□□□□□ -0.3
SSBP1Q04837 AL031008.1-201ENST00000619963 541 ntBASIC13.17□□□□□ -0.3
SSBP1Q04837 AL645728.2-202ENST00000641679 227 ntBASIC13.17□□□□□ -0.3
SSBP1Q04837 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SSBP1Q04837 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.17□□□□□ -0.3
SSBP1Q04837 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSBP1Q04837 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms