Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDL3P58872 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.16■□□□□ 0.5
RHBDL3P58872 ANKRD30BP2-201ENST00000435744 1610 ntBASIC18.16■□□□□ 0.5
RHBDL3P58872 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.16■□□□□ 0.5
RHBDL3P58872 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RHBDL3P58872 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RHBDL3P58872 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.15■□□□□ 0.5
RHBDL3P58872 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.15■□□□□ 0.5
RHBDL3P58872 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.15■□□□□ 0.5
RHBDL3P58872 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.15■□□□□ 0.5
RHBDL3P58872 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.15■□□□□ 0.5
RHBDL3P58872 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 HSPB1P2-201ENST00000448722 546 ntBASIC18.15■□□□□ 0.5
RHBDL3P58872 AC026434.2-201ENST00000506094 1078 ntBASIC18.15■□□□□ 0.5
RHBDL3P58872 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.15■□□□□ 0.5
RHBDL3P58872 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
RHBDL3P58872 RN7SL713P-201ENST00000582127 302 ntBASIC18.15■□□□□ 0.5
RHBDL3P58872 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.15■□□□□ 0.5
RHBDL3P58872 OR10B1P-201ENST00000601666 907 ntBASIC18.15■□□□□ 0.5
RHBDL3P58872 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.15■□□□□ 0.5
RHBDL3P58872 AL139099.5-201ENST00000635274 300 ntBASIC18.15■□□□□ 0.5
RHBDL3P58872 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.15■□□□□ 0.5
RHBDL3P58872 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RHBDL3P58872 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.15■□□□□ 0.5
RHBDL3P58872 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.15■□□□□ 0.5
RHBDL3P58872 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 CLUHP2-201ENST00000426660 1303 ntBASIC18.15■□□□□ 0.5
RHBDL3P58872 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.15■□□□□ 0.5
RHBDL3P58872 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDL3P58872 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.15■□□□□ 0.5
RHBDL3P58872 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.14■□□□□ 0.49
RHBDL3P58872 MIR663B-201ENST00000408361 115 ntBASIC18.14■□□□□ 0.49
RHBDL3P58872 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.14■□□□□ 0.49
RHBDL3P58872 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.14■□□□□ 0.49
RHBDL3P58872 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.14■□□□□ 0.49
RHBDL3P58872 AC104982.3-201ENST00000581995 514 ntBASIC18.14■□□□□ 0.49
RHBDL3P58872 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 AL022328.3-201ENST00000607943 679 ntBASIC18.14■□□□□ 0.49
RHBDL3P58872 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.14■□□□□ 0.49
RHBDL3P58872 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.14■□□□□ 0.49
RHBDL3P58872 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.14■□□□□ 0.49
RHBDL3P58872 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.14■□□□□ 0.49
RHBDL3P58872 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.14■□□□□ 0.49
RHBDL3P58872 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RHBDL3P58872 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDL3P58872 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 REXO1L4P-201ENST00000605109 1937 ntBASIC18.13■□□□□ 0.49
RHBDL3P58872 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.13■□□□□ 0.49
RHBDL3P58872 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RHBDL3P58872 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.13■□□□□ 0.49
RHBDL3P58872 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RHBDL3P58872 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.13■□□□□ 0.49
RHBDL3P58872 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.13■□□□□ 0.49
RHBDL3P58872 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.13■□□□□ 0.49
RHBDL3P58872 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RHBDL3P58872 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDL3P58872 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RHBDL3P58872 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RHBDL3P58872 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.13■□□□□ 0.49
RHBDL3P58872 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms