Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.59□□□□□ -0.23
FOXG1P55316 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.59□□□□□ -0.23
FOXG1P55316 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.59□□□□□ -0.23
FOXG1P55316 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.59□□□□□ -0.23
FOXG1P55316 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.59□□□□□ -0.23
FOXG1P55316 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.59□□□□□ -0.23
FOXG1P55316 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.59□□□□□ -0.23
FOXG1P55316 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.59□□□□□ -0.23
FOXG1P55316 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.59□□□□□ -0.23
FOXG1P55316 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
FOXG1P55316 CR383656.12-201ENST00000549567 513 ntBASIC13.59□□□□□ -0.23
FOXG1P55316 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.59□□□□□ -0.23
FOXG1P55316 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.59□□□□□ -0.23
FOXG1P55316 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.59□□□□□ -0.23
FOXG1P55316 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
FOXG1P55316 AL359258.3-201ENST00000622910 2331 ntBASIC13.59□□□□□ -0.23
FOXG1P55316 AP002414.2-201ENST00000591780 3365 ntBASIC13.59□□□□□ -0.23
FOXG1P55316 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.59□□□□□ -0.23
FOXG1P55316 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
FOXG1P55316 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 AC063926.2-201ENST00000623766 1308 ntBASIC13.59□□□□□ -0.23
FOXG1P55316 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.59□□□□□ -0.23
FOXG1P55316 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
FOXG1P55316 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
FOXG1P55316 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.59□□□□□ -0.23
FOXG1P55316 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FOXG1P55316 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
FOXG1P55316 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.58□□□□□ -0.23
FOXG1P55316 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
FOXG1P55316 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
FOXG1P55316 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
FOXG1P55316 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXG1P55316 AC046158.3-201ENST00000624947 2558 ntBASIC13.58□□□□□ -0.24
FOXG1P55316 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
FOXG1P55316 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
FOXG1P55316 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
FOXG1P55316 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXG1P55316 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXG1P55316 SOCS2P1-201ENST00000417727 557 ntBASIC13.58□□□□□ -0.24
FOXG1P55316 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXG1P55316 KRT17P7-201ENST00000451704 1104 ntBASIC13.58□□□□□ -0.24
FOXG1P55316 RPL13AP25-201ENST00000484130 612 ntBASIC13.58□□□□□ -0.24
FOXG1P55316 GIMAP3P-201ENST00000495150 836 ntBASIC13.58□□□□□ -0.24
FOXG1P55316 AC011495.1-201ENST00000498085 584 ntBASIC13.58□□□□□ -0.24
FOXG1P55316 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
FOXG1P55316 AP001582.1-201ENST00000525856 295 ntBASIC13.58□□□□□ -0.24
FOXG1P55316 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.58□□□□□ -0.24
FOXG1P55316 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.58□□□□□ -0.24
FOXG1P55316 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXG1P55316 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.58□□□□□ -0.24
FOXG1P55316 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXG1P55316 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 AL138799.1-201ENST00000448213 1675 ntBASIC13.58□□□□□ -0.24
FOXG1P55316 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
FOXG1P55316 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
FOXG1P55316 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
FOXG1P55316 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.58□□□□□ -0.24
FOXG1P55316 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
FOXG1P55316 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FOXG1P55316 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
FOXG1P55316 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.57□□□□□ -0.24
FOXG1P55316 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXG1P55316 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXG1P55316 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FOXG1P55316 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FOXG1P55316 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
FOXG1P55316 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms