Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.94■□□□□ 0.3
NCKAP1LP55160 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 RN7SL837P-201ENST00000463010 287 ntBASIC16.94■□□□□ 0.3
NCKAP1LP55160 RN7SL752P-201ENST00000463779 287 ntBASIC16.94■□□□□ 0.3
NCKAP1LP55160 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 AC005225.4-201ENST00000557330 545 ntBASIC16.94■□□□□ 0.3
NCKAP1LP55160 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 CU639417.3-201ENST00000624240 1404 ntBASIC16.94■□□□□ 0.3
NCKAP1LP55160 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NCKAP1LP55160 MROH4P-201ENST00000431302 1578 ntBASIC16.94■□□□□ 0.3
NCKAP1LP55160 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCKAP1LP55160 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 LINC00554-201ENST00000564841 3011 ntBASIC16.93■□□□□ 0.3
NCKAP1LP55160 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 NME2P1-201ENST00000426182 414 ntBASIC16.93■□□□□ 0.3
NCKAP1LP55160 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
NCKAP1LP55160 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKAP1LP55160 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms