Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.85□□□□□ -0.03
NR1H2P55055 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.85□□□□□ -0.03
NR1H2P55055 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.85□□□□□ -0.03
NR1H2P55055 CNN2P11-201ENST00000429351 262 ntBASIC14.85□□□□□ -0.03
NR1H2P55055 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H2P55055 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.85□□□□□ -0.03
NR1H2P55055 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.85□□□□□ -0.03
NR1H2P55055 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.85□□□□□ -0.03
NR1H2P55055 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
NR1H2P55055 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
NR1H2P55055 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NR1H2P55055 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H2P55055 AC129492.6-201ENST00000611383 1305 ntBASIC14.85□□□□□ -0.03
NR1H2P55055 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H2P55055 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H2P55055 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NR1H2P55055 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NR1H2P55055 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.85□□□□□ -0.03
NR1H2P55055 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
NR1H2P55055 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H2P55055 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H2P55055 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NR1H2P55055 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.84□□□□□ -0.03
NR1H2P55055 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.84□□□□□ -0.03
NR1H2P55055 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.84□□□□□ -0.03
NR1H2P55055 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.84□□□□□ -0.03
NR1H2P55055 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 BX640514.1-201ENST00000583223 1918 ntBASIC14.84□□□□□ -0.03
NR1H2P55055 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.84□□□□□ -0.03
NR1H2P55055 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NR1H2P55055 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.03
NR1H2P55055 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H2P55055 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H2P55055 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.83□□□□□ -0.03
NR1H2P55055 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H2P55055 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.83□□□□□ -0.03
NR1H2P55055 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
NR1H2P55055 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
NR1H2P55055 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H2P55055 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NR1H2P55055 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NR1H2P55055 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NR1H2P55055 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NR1H2P55055 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.83□□□□□ -0.04
NR1H2P55055 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms