Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC15.31■□□□□ 0.04
EMP3P54852 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.31■□□□□ 0.04
EMP3P54852 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC15.31■□□□□ 0.04
EMP3P54852 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.31■□□□□ 0.04
EMP3P54852 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.31■□□□□ 0.04
EMP3P54852 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC15.31■□□□□ 0.04
EMP3P54852 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC15.31■□□□□ 0.04
EMP3P54852 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 AC007228.2-201ENST00000602145 1328 ntBASIC15.31■□□□□ 0.04
EMP3P54852 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 AC041040.2-201ENST00000622926 2899 ntBASIC15.31■□□□□ 0.04
EMP3P54852 AP001282.1-201ENST00000531301 1499 ntBASIC15.31■□□□□ 0.04
EMP3P54852 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.31■□□□□ 0.04
EMP3P54852 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.31■□□□□ 0.04
EMP3P54852 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.31■□□□□ 0.04
EMP3P54852 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EMP3P54852 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
EMP3P54852 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.3■□□□□ 0.04
EMP3P54852 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
EMP3P54852 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
EMP3P54852 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.3■□□□□ 0.04
EMP3P54852 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.3■□□□□ 0.04
EMP3P54852 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
EMP3P54852 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.3■□□□□ 0.04
EMP3P54852 AL596087.1-201ENST00000400979 1969 ntBASIC15.3■□□□□ 0.04
EMP3P54852 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 BCRP1-201ENST00000444246 691 ntBASIC15.3■□□□□ 0.04
EMP3P54852 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 AL512638.1-201ENST00000457493 794 ntBASIC15.3■□□□□ 0.04
EMP3P54852 AC004890.2-204ENST00000481968 304 ntBASIC15.3■□□□□ 0.04
EMP3P54852 INGX-202ENST00000489074 768 ntBASIC15.3■□□□□ 0.04
EMP3P54852 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 AC090568.1-201ENST00000509499 856 ntBASIC15.3■□□□□ 0.04
EMP3P54852 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.3■□□□□ 0.04
EMP3P54852 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
EMP3P54852 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.3■□□□□ 0.04
EMP3P54852 CD69-203ENST00000536709 1020 ntTSL 2 BASIC15.3■□□□□ 0.04
EMP3P54852 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.3■□□□□ 0.04
EMP3P54852 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.3■□□□□ 0.04
EMP3P54852 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
EMP3P54852 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
EMP3P54852 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.3■□□□□ 0.04
EMP3P54852 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.3■□□□□ 0.04
EMP3P54852 AL390754.1-201ENST00000619088 582 ntBASIC15.3■□□□□ 0.04
EMP3P54852 AC012653.2-201ENST00000621880 420 ntBASIC15.3■□□□□ 0.04
EMP3P54852 AL445984.1-201ENST00000637834 659 ntBASIC15.3■□□□□ 0.04
EMP3P54852 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
EMP3P54852 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.3■□□□□ 0.04
EMP3P54852 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EMP3P54852 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.3■□□□□ 0.04
EMP3P54852 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
EMP3P54852 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMP3P54852 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.29■□□□□ 0.04
EMP3P54852 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMP3P54852 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
EMP3P54852 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMP3P54852 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
EMP3P54852 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMP3P54852 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMP3P54852 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.29■□□□□ 0.04
EMP3P54852 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EMP3P54852 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms