Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.11■□□□□ 0.33
PMS1P54277 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.11■□□□□ 0.33
PMS1P54277 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PMS1P54277 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.11■□□□□ 0.33
PMS1P54277 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.11■□□□□ 0.33
PMS1P54277 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PMS1P54277 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PMS1P54277 AC007686.3-201ENST00000619017 3487 ntBASIC17.11■□□□□ 0.33
PMS1P54277 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.11■□□□□ 0.33
PMS1P54277 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PMS1P54277 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PMS1P54277 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PMS1P54277 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PMS1P54277 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.1■□□□□ 0.33
PMS1P54277 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.1■□□□□ 0.33
PMS1P54277 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.1■□□□□ 0.33
PMS1P54277 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 TSSK5P-201ENST00000423978 907 ntBASIC17.1■□□□□ 0.33
PMS1P54277 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.1■□□□□ 0.33
PMS1P54277 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.1■□□□□ 0.33
PMS1P54277 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.1■□□□□ 0.33
PMS1P54277 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.1■□□□□ 0.33
PMS1P54277 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.1■□□□□ 0.33
PMS1P54277 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.1■□□□□ 0.33
PMS1P54277 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PMS1P54277 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PMS1P54277 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 AC087499.5-201ENST00000452760 1342 ntBASIC17.1■□□□□ 0.33
PMS1P54277 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.1■□□□□ 0.33
PMS1P54277 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.1■□□□□ 0.33
PMS1P54277 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PMS1P54277 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 AC100757.3-201ENST00000622361 1406 ntBASIC17.1■□□□□ 0.33
PMS1P54277 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PMS1P54277 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.1■□□□□ 0.33
PMS1P54277 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PMS1P54277 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.09■□□□□ 0.33
PMS1P54277 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PMS1P54277 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PMS1P54277 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.09■□□□□ 0.33
PMS1P54277 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.09■□□□□ 0.33
PMS1P54277 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PMS1P54277 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.09■□□□□ 0.33
PMS1P54277 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.09■□□□□ 0.33
PMS1P54277 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.09■□□□□ 0.33
PMS1P54277 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.09■□□□□ 0.33
PMS1P54277 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.09■□□□□ 0.33
PMS1P54277 DUX4L27-201ENST00000554796 1261 ntBASIC17.09■□□□□ 0.33
PMS1P54277 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
PMS1P54277 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.09■□□□□ 0.33
PMS1P54277 AL590560.3-201ENST00000623350 461 ntBASIC17.09■□□□□ 0.33
PMS1P54277 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PMS1P54277 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PMS1P54277 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PMS1P54277 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PMS1P54277 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.09■□□□□ 0.33
PMS1P54277 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PMS1P54277 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.09■□□□□ 0.33
PMS1P54277 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PMS1P54277 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PMS1P54277 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PMS1P54277 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.08■□□□□ 0.33
PMS1P54277 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms