Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.32■□□□□ 0.04
GTF2A1P52655 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.32■□□□□ 0.04
GTF2A1P52655 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC15.32■□□□□ 0.04
GTF2A1P52655 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 AL353692.3-201ENST00000407031 1396 ntBASIC15.32■□□□□ 0.04
GTF2A1P52655 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.32■□□□□ 0.04
GTF2A1P52655 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC15.32■□□□□ 0.04
GTF2A1P52655 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GTF2A1P52655 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC15.31■□□□□ 0.04
GTF2A1P52655 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
GTF2A1P52655 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC15.31■□□□□ 0.04
GTF2A1P52655 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.31■□□□□ 0.04
GTF2A1P52655 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.31■□□□□ 0.04
GTF2A1P52655 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 AL138966.2-201ENST00000621997 464 ntBASIC15.31■□□□□ 0.04
GTF2A1P52655 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC15.31■□□□□ 0.04
GTF2A1P52655 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GTF2A1P52655 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GTF2A1P52655 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GTF2A1P52655 AC126365.1-201ENST00000578585 1514 ntBASIC15.31■□□□□ 0.04
GTF2A1P52655 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.31■□□□□ 0.04
GTF2A1P52655 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GTF2A1P52655 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GTF2A1P52655 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GTF2A1P52655 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.31■□□□□ 0.04
GTF2A1P52655 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC15.31■□□□□ 0.04
GTF2A1P52655 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
GTF2A1P52655 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GTF2A1P52655 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GTF2A1P52655 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GTF2A1P52655 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
GTF2A1P52655 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GTF2A1P52655 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
GTF2A1P52655 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms