Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC005252.2-201ENST00000624630 1141 ntBASIC17.5■□□□□ 0.39
USP11P51784 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.5■□□□□ 0.39
USP11P51784 PRSS30P-206ENST00000641773 873 ntBASIC17.5■□□□□ 0.39
USP11P51784 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP11P51784 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP11P51784 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
USP11P51784 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
USP11P51784 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP11P51784 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP11P51784 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP11P51784 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP11P51784 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP11P51784 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP11P51784 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP11P51784 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 AC063926.2-201ENST00000623766 1308 ntBASIC17.49■□□□□ 0.39
USP11P51784 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
USP11P51784 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
USP11P51784 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.49■□□□□ 0.39
USP11P51784 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
USP11P51784 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.49■□□□□ 0.39
USP11P51784 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.49■□□□□ 0.39
USP11P51784 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
USP11P51784 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.49■□□□□ 0.39
USP11P51784 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.49■□□□□ 0.39
USP11P51784 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.49■□□□□ 0.39
USP11P51784 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
USP11P51784 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.49■□□□□ 0.39
USP11P51784 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 AC009486.1-201ENST00000569860 813 ntBASIC17.49■□□□□ 0.39
USP11P51784 AC132938.2-201ENST00000579188 680 ntBASIC17.49■□□□□ 0.39
USP11P51784 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
USP11P51784 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.49■□□□□ 0.39
USP11P51784 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.49■□□□□ 0.39
USP11P51784 AC010319.3-201ENST00000597028 470 ntBASIC17.49■□□□□ 0.39
USP11P51784 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP11P51784 IGHV3-72-202ENST00000621503 303 ntBASIC17.49■□□□□ 0.39
USP11P51784 AL591163.1-201ENST00000641757 987 ntBASIC17.49■□□□□ 0.39
USP11P51784 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.49■□□□□ 0.39
USP11P51784 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.49■□□□□ 0.39
USP11P51784 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.49■□□□□ 0.39
USP11P51784 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.49■□□□□ 0.39
USP11P51784 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
USP11P51784 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USP11P51784 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.48■□□□□ 0.39
USP11P51784 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.48■□□□□ 0.39
USP11P51784 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.48■□□□□ 0.39
USP11P51784 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.48■□□□□ 0.39
USP11P51784 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.48■□□□□ 0.39
USP11P51784 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.48■□□□□ 0.39
USP11P51784 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.48■□□□□ 0.39
USP11P51784 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.48■□□□□ 0.39
USP11P51784 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.48■□□□□ 0.39
USP11P51784 AP005019.2-201ENST00000615104 511 ntBASIC17.48■□□□□ 0.39
USP11P51784 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.48■□□□□ 0.39
USP11P51784 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.48■□□□□ 0.39
USP11P51784 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.48■□□□□ 0.39
USP11P51784 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
USP11P51784 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
USP11P51784 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USP11P51784 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP11P51784 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
USP11P51784 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.48■□□□□ 0.39
USP11P51784 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.48■□□□□ 0.39
USP11P51784 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USP11P51784 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.47■□□□□ 0.39
USP11P51784 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms