Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC34P49427 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 AC073439.1-201ENST00000624121 1774 ntBASIC12.36□□□□□ -0.43
CDC34P49427 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC34P49427 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 IER3-202ENST00000376377 1350 ntBASIC12.36□□□□□ -0.43
CDC34P49427 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC34P49427 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CDC34P49427 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.36□□□□□ -0.43
CDC34P49427 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CDC34P49427 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 PCED1CP-201ENST00000419887 785 ntBASIC12.36□□□□□ -0.43
CDC34P49427 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 IGHV3-65-201ENST00000523210 341 ntBASIC12.36□□□□□ -0.43
CDC34P49427 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.36□□□□□ -0.43
CDC34P49427 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.36□□□□□ -0.43
CDC34P49427 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.36□□□□□ -0.43
CDC34P49427 AC107918.4-202ENST00000641623 219 ntBASIC12.36□□□□□ -0.43
CDC34P49427 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC34P49427 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC34P49427 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 DMBT1P1-203ENST00000636837 4628 ntBASIC12.36□□□□□ -0.43
CDC34P49427 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC34P49427 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 AC118758.2-201ENST00000614242 2813 ntBASIC12.36□□□□□ -0.43
CDC34P49427 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.36□□□□□ -0.43
CDC34P49427 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CDC34P49427 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC34P49427 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.36□□□□□ -0.43
CDC34P49427 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CDC34P49427 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDC34P49427 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 AL359183.1-201ENST00000623796 2132 ntBASIC12.35□□□□□ -0.43
CDC34P49427 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CDC34P49427 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CDC34P49427 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CDC34P49427 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CDC34P49427 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
CDC34P49427 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CDC34P49427 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.35□□□□□ -0.43
CDC34P49427 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.35□□□□□ -0.43
CDC34P49427 FAM185BP-201ENST00000443595 716 ntBASIC12.35□□□□□ -0.43
CDC34P49427 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 RN7SL850P-201ENST00000579959 291 ntBASIC12.35□□□□□ -0.43
CDC34P49427 AL078644.1-201ENST00000609881 752 ntBASIC12.35□□□□□ -0.43
CDC34P49427 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.35□□□□□ -0.43
CDC34P49427 MIR1199-201ENST00000621445 119 ntBASIC12.35□□□□□ -0.43
CDC34P49427 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDC34P49427 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms