Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.31■□□□□ 0.36
TM4SF4P48230 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TM4SF4P48230 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TM4SF4P48230 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TM4SF4P48230 BAK1P1-201ENST00000317045 636 ntBASIC17.31■□□□□ 0.36
TM4SF4P48230 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.31■□□□□ 0.36
TM4SF4P48230 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.31■□□□□ 0.36
TM4SF4P48230 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 TMCO5B-205ENST00000530020 894 ntBASIC17.31■□□□□ 0.36
TM4SF4P48230 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.31■□□□□ 0.36
TM4SF4P48230 AC025262.2-201ENST00000623975 1056 ntBASIC17.31■□□□□ 0.36
TM4SF4P48230 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.31■□□□□ 0.36
TM4SF4P48230 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.31■□□□□ 0.36
TM4SF4P48230 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.31■□□□□ 0.36
TM4SF4P48230 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF4P48230 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 AC092171.3-201ENST00000610122 2651 ntBASIC17.3■□□□□ 0.36
TM4SF4P48230 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.3■□□□□ 0.36
TM4SF4P48230 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TM4SF4P48230 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17.3■□□□□ 0.36
TM4SF4P48230 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.3■□□□□ 0.36
TM4SF4P48230 MIR557-201ENST00000385239 98 ntBASIC17.3■□□□□ 0.36
TM4SF4P48230 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.3■□□□□ 0.36
TM4SF4P48230 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
TM4SF4P48230 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TM4SF4P48230 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TM4SF4P48230 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 AC093752.3-201ENST00000567343 901 ntBASIC17.3■□□□□ 0.36
TM4SF4P48230 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.3■□□□□ 0.36
TM4SF4P48230 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TM4SF4P48230 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.3■□□□□ 0.36
TM4SF4P48230 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.3■□□□□ 0.36
TM4SF4P48230 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.3■□□□□ 0.36
TM4SF4P48230 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.3■□□□□ 0.36
TM4SF4P48230 AC020910.5-201ENST00000623668 1865 ntBASIC17.3■□□□□ 0.36
TM4SF4P48230 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 AC011840.2-201ENST00000563063 1520 ntBASIC17.3■□□□□ 0.36
TM4SF4P48230 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TM4SF4P48230 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.3■□□□□ 0.36
TM4SF4P48230 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF4P48230 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.3■□□□□ 0.36
TM4SF4P48230 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.3■□□□□ 0.36
TM4SF4P48230 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TM4SF4P48230 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TM4SF4P48230 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TM4SF4P48230 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TM4SF4P48230 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TM4SF4P48230 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TM4SF4P48230 AL583805.1-201ENST00000391389 531 ntBASIC17.29■□□□□ 0.36
TM4SF4P48230 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.29■□□□□ 0.36
TM4SF4P48230 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.29■□□□□ 0.36
TM4SF4P48230 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.29■□□□□ 0.36
TM4SF4P48230 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.29■□□□□ 0.36
TM4SF4P48230 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 MIR4522-201ENST00000584932 87 ntBASIC17.29■□□□□ 0.36
TM4SF4P48230 MIR6720-201ENST00000611664 98 ntBASIC17.29■□□□□ 0.36
TM4SF4P48230 AC009560.1-201ENST00000620208 434 ntBASIC17.29■□□□□ 0.36
TM4SF4P48230 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms