Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A12P48065 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A12P48065 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 ACE3P-201ENST00000423435 1973 ntBASIC14.96□□□□□ -0.01
SLC6A12P48065 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A12P48065 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC6A12P48065 REXO1L2P-201ENST00000425429 2069 ntBASIC14.96□□□□□ -0.01
SLC6A12P48065 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC6A12P48065 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A12P48065 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC6A12P48065 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A12P48065 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC6A12P48065 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC6A12P48065 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A12P48065 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A12P48065 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A12P48065 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A12P48065 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A12P48065 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SLC6A12P48065 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A12P48065 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A12P48065 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
SLC6A12P48065 AC023310.3-201ENST00000557027 670 ntBASIC14.96□□□□□ -0.01
SLC6A12P48065 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC6A12P48065 AC100756.1-201ENST00000562736 682 ntBASIC14.96□□□□□ -0.01
SLC6A12P48065 AC138749.3-201ENST00000567691 622 ntBASIC14.96□□□□□ -0.01
SLC6A12P48065 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A12P48065 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC6A12P48065 AC116165.1-201ENST00000611806 668 ntBASIC14.96□□□□□ -0.01
SLC6A12P48065 LINC01101-201ENST00000622953 1884 ntBASIC14.96□□□□□ -0.01
SLC6A12P48065 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC6A12P48065 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SLC6A12P48065 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC6A12P48065 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC6A12P48065 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.96□□□□□ -0.02
SLC6A12P48065 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
SLC6A12P48065 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC6A12P48065 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
SLC6A12P48065 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
SLC6A12P48065 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SLC6A12P48065 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC6A12P48065 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC6A12P48065 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 CICP24-201ENST00000605464 2705 ntBASIC14.95□□□□□ -0.02
SLC6A12P48065 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SLC6A12P48065 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SLC6A12P48065 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC6A12P48065 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC6A12P48065 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
SLC6A12P48065 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SLC6A12P48065 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC6A12P48065 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC6A12P48065 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC6A12P48065 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SLC6A12P48065 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC6A12P48065 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SLC6A12P48065 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.95□□□□□ -0.02
SLC6A12P48065 RNA5SP421-201ENST00000516864 134 ntBASIC14.95□□□□□ -0.02
SLC6A12P48065 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC6A12P48065 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
SLC6A12P48065 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC6A12P48065 AC036164.1-201ENST00000570544 333 ntBASIC14.95□□□□□ -0.02
SLC6A12P48065 SAMD11P1-201ENST00000571429 661 ntBASIC14.95□□□□□ -0.02
SLC6A12P48065 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SLC6A12P48065 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SLC6A12P48065 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.95□□□□□ -0.02
SLC6A12P48065 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SLC6A12P48065 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 AJ011931.1-201ENST00000618749 2492 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms