Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 AC138035.3-201ENST00000622706 2791 ntBASIC14.06□□□□□ -0.16
APOBEC1P41238 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOBEC1P41238 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APOBEC1P41238 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.06□□□□□ -0.16
APOBEC1P41238 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOBEC1P41238 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
APOBEC1P41238 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
APOBEC1P41238 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.06□□□□□ -0.16
APOBEC1P41238 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.06□□□□□ -0.16
APOBEC1P41238 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 UGT1A2P-201ENST00000454886 866 ntBASIC14.06□□□□□ -0.16
APOBEC1P41238 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APOBEC1P41238 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.06□□□□□ -0.16
APOBEC1P41238 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.06□□□□□ -0.16
APOBEC1P41238 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOBEC1P41238 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 AC023310.3-201ENST00000557027 670 ntBASIC14.06□□□□□ -0.16
APOBEC1P41238 AC100756.1-201ENST00000562736 682 ntBASIC14.06□□□□□ -0.16
APOBEC1P41238 AC138749.3-201ENST00000567691 622 ntBASIC14.06□□□□□ -0.16
APOBEC1P41238 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.06□□□□□ -0.16
APOBEC1P41238 AC116165.1-201ENST00000611806 668 ntBASIC14.06□□□□□ -0.16
APOBEC1P41238 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.06□□□□□ -0.16
APOBEC1P41238 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.06□□□□□ -0.16
APOBEC1P41238 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.06□□□□□ -0.16
APOBEC1P41238 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.06□□□□□ -0.16
APOBEC1P41238 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
APOBEC1P41238 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOBEC1P41238 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.06□□□□□ -0.16
APOBEC1P41238 AC023157.3-201ENST00000619086 2088 ntBASIC14.06□□□□□ -0.16
APOBEC1P41238 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
APOBEC1P41238 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 AC006486.2-201ENST00000624246 2199 ntBASIC14.06□□□□□ -0.16
APOBEC1P41238 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.06□□□□□ -0.16
APOBEC1P41238 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.06□□□□□ -0.16
APOBEC1P41238 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOBEC1P41238 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.05□□□□□ -0.16
APOBEC1P41238 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.05□□□□□ -0.16
APOBEC1P41238 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.05□□□□□ -0.16
APOBEC1P41238 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
APOBEC1P41238 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
APOBEC1P41238 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.05□□□□□ -0.16
APOBEC1P41238 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.05□□□□□ -0.16
APOBEC1P41238 BCRP1-201ENST00000444246 691 ntBASIC14.05□□□□□ -0.16
APOBEC1P41238 SPTLC1P1-201ENST00000447199 261 ntBASIC14.05□□□□□ -0.16
APOBEC1P41238 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
APOBEC1P41238 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.05□□□□□ -0.16
APOBEC1P41238 RN7SL399P-201ENST00000471648 279 ntBASIC14.05□□□□□ -0.16
APOBEC1P41238 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.05□□□□□ -0.16
APOBEC1P41238 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.05□□□□□ -0.16
APOBEC1P41238 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.05□□□□□ -0.16
APOBEC1P41238 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.05□□□□□ -0.16
APOBEC1P41238 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.05□□□□□ -0.16
APOBEC1P41238 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.05□□□□□ -0.16
APOBEC1P41238 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 AC099568.2-201ENST00000609194 695 ntBASIC14.05□□□□□ -0.16
APOBEC1P41238 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.05□□□□□ -0.16
APOBEC1P41238 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.05□□□□□ -0.16
APOBEC1P41238 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
APOBEC1P41238 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 AL391825.1-201ENST00000457671 1364 ntBASIC14.05□□□□□ -0.16
APOBEC1P41238 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOBEC1P41238 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms