Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PRPHP41219 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PRPHP41219 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.54■□□□□ 0.4
PRPHP41219 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PRPHP41219 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 MEP1AP4-201ENST00000423244 1087 ntBASIC17.54■□□□□ 0.4
PRPHP41219 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.54■□□□□ 0.4
PRPHP41219 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.54■□□□□ 0.4
PRPHP41219 UGT1A2P-201ENST00000454886 866 ntBASIC17.54■□□□□ 0.4
PRPHP41219 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.54■□□□□ 0.4
PRPHP41219 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.54■□□□□ 0.4
PRPHP41219 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.54■□□□□ 0.4
PRPHP41219 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
PRPHP41219 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.54■□□□□ 0.4
PRPHP41219 RRP7BP-205ENST00000566851 833 ntBASIC17.54■□□□□ 0.4
PRPHP41219 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.54■□□□□ 0.4
PRPHP41219 AC009118.2-201ENST00000613275 655 ntBASIC17.54■□□□□ 0.4
PRPHP41219 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PRPHP41219 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.54■□□□□ 0.4
PRPHP41219 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PRPHP41219 CICP11-201ENST00000434745 2827 ntBASIC17.54■□□□□ 0.4
PRPHP41219 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PRPHP41219 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRPHP41219 AC144831.1-201ENST00000573312 2656 ntBASIC17.54■□□□□ 0.4
PRPHP41219 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.53■□□□□ 0.4
PRPHP41219 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PRPHP41219 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.53■□□□□ 0.4
PRPHP41219 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.53■□□□□ 0.4
PRPHP41219 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.53■□□□□ 0.4
PRPHP41219 GAPDHP40-201ENST00000505218 1006 ntBASIC17.53■□□□□ 0.4
PRPHP41219 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.53■□□□□ 0.4
PRPHP41219 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.53■□□□□ 0.4
PRPHP41219 TPRX2P-201ENST00000535362 881 ntBASIC17.53■□□□□ 0.4
PRPHP41219 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.53■□□□□ 0.4
PRPHP41219 AC023310.3-201ENST00000557027 670 ntBASIC17.53■□□□□ 0.4
PRPHP41219 AC100756.1-201ENST00000562736 682 ntBASIC17.53■□□□□ 0.4
PRPHP41219 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.53■□□□□ 0.4
PRPHP41219 AC138749.3-201ENST00000567691 622 ntBASIC17.53■□□□□ 0.4
PRPHP41219 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.53■□□□□ 0.4
PRPHP41219 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.53■□□□□ 0.4
PRPHP41219 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 AC116165.1-201ENST00000611806 668 ntBASIC17.53■□□□□ 0.4
PRPHP41219 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.53■□□□□ 0.4
PRPHP41219 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.53■□□□□ 0.4
PRPHP41219 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.53■□□□□ 0.4
PRPHP41219 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.53■□□□□ 0.4
PRPHP41219 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.53■□□□□ 0.4
PRPHP41219 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRPHP41219 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.53■□□□□ 0.4
PRPHP41219 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRPHP41219 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRPHP41219 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.52■□□□□ 0.4
PRPHP41219 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PRPHP41219 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms