Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.95□□□□□ -0.02
PTX3P26022 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTX3P26022 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTX3P26022 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTX3P26022 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.95□□□□□ -0.02
PTX3P26022 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PTX3P26022 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.95□□□□□ -0.02
PTX3P26022 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.95□□□□□ -0.02
PTX3P26022 AC055876.3-201ENST00000431496 288 ntBASIC14.95□□□□□ -0.02
PTX3P26022 KRT18P64-201ENST00000434946 1219 ntBASIC14.95□□□□□ -0.02
PTX3P26022 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.95□□□□□ -0.02
PTX3P26022 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.95□□□□□ -0.02
PTX3P26022 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.95□□□□□ -0.02
PTX3P26022 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTX3P26022 TIMM17BP1-201ENST00000545713 516 ntBASIC14.95□□□□□ -0.02
PTX3P26022 AC044860.1-202ENST00000559481 777 ntBASIC14.95□□□□□ -0.02
PTX3P26022 AC015910.1-201ENST00000579400 975 ntBASIC14.95□□□□□ -0.02
PTX3P26022 LINC01115-203ENST00000606068 577 ntBASIC14.95□□□□□ -0.02
PTX3P26022 AC138649.4-201ENST00000612222 287 ntBASIC14.95□□□□□ -0.02
PTX3P26022 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
PTX3P26022 OR2I1P-209ENST00000641730 5365 ntBASIC14.95□□□□□ -0.02
PTX3P26022 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTX3P26022 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PTX3P26022 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.95□□□□□ -0.02
PTX3P26022 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.95□□□□□ -0.02
PTX3P26022 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTX3P26022 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.95□□□□□ -0.02
PTX3P26022 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTX3P26022 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PTX3P26022 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTX3P26022 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.95□□□□□ -0.02
PTX3P26022 AC138969.3-201ENST00000546612 1459 ntBASIC14.95□□□□□ -0.02
PTX3P26022 AC138932.2-201ENST00000548268 1459 ntBASIC14.95□□□□□ -0.02
PTX3P26022 AC126755.4-201ENST00000549796 1459 ntBASIC14.95□□□□□ -0.02
PTX3P26022 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PTX3P26022 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PTX3P26022 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.94□□□□□ -0.02
PTX3P26022 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PTX3P26022 AC148477.4-201ENST00000613430 1793 ntBASIC14.94□□□□□ -0.02
PTX3P26022 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PTX3P26022 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.94□□□□□ -0.02
PTX3P26022 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.94□□□□□ -0.02
PTX3P26022 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.94□□□□□ -0.02
PTX3P26022 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.94□□□□□ -0.02
PTX3P26022 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.94□□□□□ -0.02
PTX3P26022 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PTX3P26022 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.94□□□□□ -0.02
PTX3P26022 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.94□□□□□ -0.02
PTX3P26022 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.94□□□□□ -0.02
PTX3P26022 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
PTX3P26022 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.94□□□□□ -0.02
PTX3P26022 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
PTX3P26022 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 BTBD7P1-201ENST00000447253 1453 ntBASIC14.94□□□□□ -0.02
PTX3P26022 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PTX3P26022 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTX3P26022 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.94□□□□□ -0.02
PTX3P26022 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.93□□□□□ -0.02
PTX3P26022 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.93□□□□□ -0.02
PTX3P26022 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms