Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LMO1P25800 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.08□□□□□ -0.32
LMO1P25800 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LMO1P25800 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.08□□□□□ -0.32
LMO1P25800 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.08□□□□□ -0.32
LMO1P25800 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.08□□□□□ -0.32
LMO1P25800 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.08□□□□□ -0.32
LMO1P25800 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LMO1P25800 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LMO1P25800 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.08□□□□□ -0.32
LMO1P25800 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LMO1P25800 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LMO1P25800 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LMO1P25800 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.08□□□□□ -0.32
LMO1P25800 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.08□□□□□ -0.32
LMO1P25800 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LMO1P25800 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LMO1P25800 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.08□□□□□ -0.32
LMO1P25800 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LMO1P25800 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LMO1P25800 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.07□□□□□ -0.32
LMO1P25800 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 MROH4P-201ENST00000431302 1578 ntBASIC13.07□□□□□ -0.32
LMO1P25800 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.07□□□□□ -0.32
LMO1P25800 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
LMO1P25800 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.07□□□□□ -0.32
LMO1P25800 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.07□□□□□ -0.32
LMO1P25800 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
LMO1P25800 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.07□□□□□ -0.32
LMO1P25800 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.07□□□□□ -0.32
LMO1P25800 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.07□□□□□ -0.32
LMO1P25800 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 AC138969.3-201ENST00000546612 1459 ntBASIC13.07□□□□□ -0.32
LMO1P25800 AC138932.2-201ENST00000548268 1459 ntBASIC13.07□□□□□ -0.32
LMO1P25800 AC126755.4-201ENST00000549796 1459 ntBASIC13.07□□□□□ -0.32
LMO1P25800 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.07□□□□□ -0.32
LMO1P25800 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LMO1P25800 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LMO1P25800 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LMO1P25800 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LMO1P25800 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.07□□□□□ -0.32
LMO1P25800 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.07□□□□□ -0.32
LMO1P25800 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LMO1P25800 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.06□□□□□ -0.32
LMO1P25800 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LMO1P25800 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.06□□□□□ -0.32
LMO1P25800 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
LMO1P25800 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.06□□□□□ -0.32
LMO1P25800 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LMO1P25800 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms