Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
APCP25054 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.69□□□□□ -0.38
APCP25054 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.69□□□□□ -0.38
APCP25054 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12.69□□□□□ -0.38
APCP25054 DUT-207ENST00000559416 635 ntTSL 2 BASIC12.69□□□□□ -0.38
APCP25054 SIGLEC18P-201ENST00000602271 909 ntBASIC12.69□□□□□ -0.38
APCP25054 AC011471.3-201ENST00000623576 402 ntBASIC12.69□□□□□ -0.38
APCP25054 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.69□□□□□ -0.38
APCP25054 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.69□□□□□ -0.38
APCP25054 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.69□□□□□ -0.38
APCP25054 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.69□□□□□ -0.38
APCP25054 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.69□□□□□ -0.38
APCP25054 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.69□□□□□ -0.38
APCP25054 AL807761.2-201ENST00000422849 729 ntBASIC12.69□□□□□ -0.38
APCP25054 FTH1P22-201ENST00000456305 520 ntBASIC12.69□□□□□ -0.38
APCP25054 RN7SL81P-201ENST00000493781 261 ntBASIC12.69□□□□□ -0.38
APCP25054 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.69□□□□□ -0.38
APCP25054 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.69□□□□□ -0.38
APCP25054 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
APCP25054 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
APCP25054 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.68□□□□□ -0.38
APCP25054 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
APCP25054 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
APCP25054 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC12.68□□□□□ -0.38
APCP25054 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
APCP25054 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.68□□□□□ -0.38
APCP25054 AL645728.2-202ENST00000641679 227 ntBASIC12.68□□□□□ -0.38
APCP25054 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 AL109809.1-201ENST00000418979 1367 ntBASIC12.68□□□□□ -0.38
APCP25054 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.68□□□□□ -0.38
APCP25054 PKD1P6-201ENST00000343738 4769 ntBASIC12.68□□□□□ -0.38
APCP25054 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
APCP25054 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.68□□□□□ -0.38
APCP25054 AL592076.1-201ENST00000424448 303 ntBASIC12.68□□□□□ -0.38
APCP25054 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.68□□□□□ -0.38
APCP25054 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC12.68□□□□□ -0.38
APCP25054 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC12.68□□□□□ -0.38
APCP25054 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.68□□□□□ -0.38
APCP25054 MBP-238ENST00000580402 915 ntTSL 5 BASIC12.68□□□□□ -0.38
APCP25054 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC12.68□□□□□ -0.38
APCP25054 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.68□□□□□ -0.38
APCP25054 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
APCP25054 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.68□□□□□ -0.38
APCP25054 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.68□□□□□ -0.38
APCP25054 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.68□□□□□ -0.38
APCP25054 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APCP25054 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APCP25054 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APCP25054 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.67□□□□□ -0.38
APCP25054 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APCP25054 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
APCP25054 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.67□□□□□ -0.38
APCP25054 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.67□□□□□ -0.38
APCP25054 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
APCP25054 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC12.67□□□□□ -0.38
APCP25054 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APCP25054 FRMPD2B-201ENST00000431305 1347 ntBASIC12.67□□□□□ -0.38
APCP25054 AL359258.3-201ENST00000622910 2331 ntBASIC12.67□□□□□ -0.38
APCP25054 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APCP25054 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.67□□□□□ -0.38
APCP25054 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APCP25054 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APCP25054 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
APCP25054 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APCP25054 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APCP25054 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC12.67□□□□□ -0.38
APCP25054 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms