Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
CDH3P22223 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH3P22223 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH3P22223 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDH3P22223 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CDH3P22223 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH3P22223 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH3P22223 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDH3P22223 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.33■□□□□ 0.05
CDH3P22223 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
CDH3P22223 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDH3P22223 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CDH3P22223 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
CDH3P22223 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH3P22223 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 AC015922.1-201ENST00000421102 1152 ntBASIC15.33■□□□□ 0.04
CDH3P22223 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH3P22223 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH3P22223 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.33■□□□□ 0.04
CDH3P22223 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CDH3P22223 SPDYE18-201ENST00000510091 1050 ntBASIC15.33■□□□□ 0.04
CDH3P22223 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH3P22223 TIMM17BP1-201ENST00000545713 516 ntBASIC15.33■□□□□ 0.04
CDH3P22223 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.33■□□□□ 0.04
CDH3P22223 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
CDH3P22223 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CDH3P22223 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH3P22223 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
CDH3P22223 AC013268.4-201ENST00000637413 2228 ntBASIC15.33■□□□□ 0.04
CDH3P22223 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH3P22223 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.33■□□□□ 0.04
CDH3P22223 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CDH3P22223 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDH3P22223 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CDH3P22223 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CDH3P22223 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH3P22223 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH3P22223 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CDH3P22223 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH3P22223 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH3P22223 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH3P22223 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH3P22223 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.32■□□□□ 0.04
CDH3P22223 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH3P22223 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.32■□□□□ 0.04
CDH3P22223 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH3P22223 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
CDH3P22223 SRD5A3P1-201ENST00000603021 949 ntBASIC15.32■□□□□ 0.04
CDH3P22223 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDH3P22223 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.32■□□□□ 0.04
CDH3P22223 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDH3P22223 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDH3P22223 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms