Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.71■□□□□ 0.27
CD58P19256 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.71■□□□□ 0.27
CD58P19256 CLK3P2-201ENST00000427566 1453 ntBASIC16.71■□□□□ 0.27
CD58P19256 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.71■□□□□ 0.27
CD58P19256 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CD58P19256 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CD58P19256 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CD58P19256 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CD58P19256 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CD58P19256 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD58P19256 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CD58P19256 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.71■□□□□ 0.26
CD58P19256 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 TMBIM7P-203ENST00000641617 1718 ntBASIC16.7■□□□□ 0.26
CD58P19256 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CD58P19256 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CD58P19256 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CD58P19256 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CD58P19256 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.7■□□□□ 0.26
CD58P19256 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.7■□□□□ 0.26
CD58P19256 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 AC084364.1-201ENST00000551967 1556 ntBASIC16.7■□□□□ 0.26
CD58P19256 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.7■□□□□ 0.26
CD58P19256 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.7■□□□□ 0.26
CD58P19256 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CD58P19256 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.7■□□□□ 0.26
CD58P19256 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.7■□□□□ 0.26
CD58P19256 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.7■□□□□ 0.26
CD58P19256 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.7■□□□□ 0.26
CD58P19256 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 C18orf15-201ENST00000623680 2534 ntBASIC16.7■□□□□ 0.26
CD58P19256 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
CD58P19256 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CD58P19256 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CD58P19256 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.69■□□□□ 0.26
CD58P19256 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.69■□□□□ 0.26
CD58P19256 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CD58P19256 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.69■□□□□ 0.26
CD58P19256 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.69■□□□□ 0.26
CD58P19256 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CD58P19256 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.69■□□□□ 0.26
CD58P19256 AL133267.1-201ENST00000398220 340 ntBASIC16.69■□□□□ 0.26
CD58P19256 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.69■□□□□ 0.26
CD58P19256 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CD58P19256 TERF1P3-201ENST00000505638 1227 ntBASIC16.69■□□□□ 0.26
CD58P19256 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.69■□□□□ 0.26
CD58P19256 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.69■□□□□ 0.26
CD58P19256 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.69■□□□□ 0.26
CD58P19256 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.69■□□□□ 0.26
CD58P19256 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.69■□□□□ 0.26
CD58P19256 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.69■□□□□ 0.26
CD58P19256 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.69■□□□□ 0.26
CD58P19256 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CD58P19256 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms