Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
VCLP18206 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.71■□□□□ 0.11
VCLP18206 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VCLP18206 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.71■□□□□ 0.11
VCLP18206 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.71■□□□□ 0.11
VCLP18206 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.71■□□□□ 0.11
VCLP18206 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.71■□□□□ 0.11
VCLP18206 SDHAP3-202ENST00000515467 728 ntBASIC15.71■□□□□ 0.11
VCLP18206 ZNF890P-202ENST00000530367 1156 ntBASIC15.71■□□□□ 0.11
VCLP18206 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.71■□□□□ 0.11
VCLP18206 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.71■□□□□ 0.11
VCLP18206 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VCLP18206 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
VCLP18206 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
VCLP18206 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
VCLP18206 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VCLP18206 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
VCLP18206 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VCLP18206 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VCLP18206 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VCLP18206 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VCLP18206 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.7■□□□□ 0.1
VCLP18206 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
VCLP18206 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
VCLP18206 EEF1DP4-201ENST00000446006 880 ntBASIC15.7■□□□□ 0.1
VCLP18206 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.7■□□□□ 0.1
VCLP18206 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.7■□□□□ 0.1
VCLP18206 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.7■□□□□ 0.1
VCLP18206 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VCLP18206 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.7■□□□□ 0.1
VCLP18206 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 MIR4745-201ENST00000577608 62 ntBASIC15.7■□□□□ 0.1
VCLP18206 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 AC009118.2-201ENST00000613275 655 ntBASIC15.7■□□□□ 0.1
VCLP18206 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.7■□□□□ 0.1
VCLP18206 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VCLP18206 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VCLP18206 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.7■□□□□ 0.1
VCLP18206 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.7■□□□□ 0.1
VCLP18206 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 BNIP3P1-202ENST00000550043 1585 ntBASIC15.7■□□□□ 0.1
VCLP18206 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCLP18206 AC139749.1-202ENST00000617529 3139 ntBASIC15.7■□□□□ 0.1
VCLP18206 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.7■□□□□ 0.1
VCLP18206 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VCLP18206 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VCLP18206 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VCLP18206 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCLP18206 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.69■□□□□ 0.1
VCLP18206 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCLP18206 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VCLP18206 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.69■□□□□ 0.1
VCLP18206 GRK6P1-201ENST00000400595 1711 ntBASIC15.69■□□□□ 0.1
VCLP18206 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VCLP18206 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
VCLP18206 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.69■□□□□ 0.1
VCLP18206 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VCLP18206 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCLP18206 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VCLP18206 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCLP18206 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
VCLP18206 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.69■□□□□ 0.1
VCLP18206 FAM207CP-201ENST00000443486 507 ntBASIC15.69■□□□□ 0.1
VCLP18206 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.69■□□□□ 0.1
VCLP18206 TSPY16P-201ENST00000449843 468 ntBASIC15.69■□□□□ 0.1
VCLP18206 AC009477.1-201ENST00000452936 217 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms