Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.09■□□□□ 0.33
ATF7P17544 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.09■□□□□ 0.33
ATF7P17544 SLC25A47P1-201ENST00000531577 414 ntBASIC17.09■□□□□ 0.33
ATF7P17544 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.09■□□□□ 0.33
ATF7P17544 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.09■□□□□ 0.33
ATF7P17544 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.09■□□□□ 0.33
ATF7P17544 AL049840.4-201ENST00000602422 811 ntBASIC17.09■□□□□ 0.33
ATF7P17544 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.09■□□□□ 0.33
ATF7P17544 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATF7P17544 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF7P17544 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATF7P17544 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.09■□□□□ 0.33
ATF7P17544 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATF7P17544 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ATF7P17544 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATF7P17544 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATF7P17544 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ATF7P17544 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.08■□□□□ 0.33
ATF7P17544 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.08■□□□□ 0.33
ATF7P17544 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.08■□□□□ 0.33
ATF7P17544 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATF7P17544 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.08■□□□□ 0.33
ATF7P17544 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATF7P17544 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATF7P17544 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.08■□□□□ 0.33
ATF7P17544 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.08■□□□□ 0.32
ATF7P17544 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
ATF7P17544 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.08■□□□□ 0.32
ATF7P17544 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.08■□□□□ 0.32
ATF7P17544 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.08■□□□□ 0.32
ATF7P17544 VDAC1P7-201ENST00000462417 847 ntBASIC17.08■□□□□ 0.32
ATF7P17544 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ATF7P17544 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.08■□□□□ 0.32
ATF7P17544 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ATF7P17544 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.08■□□□□ 0.32
ATF7P17544 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.08■□□□□ 0.32
ATF7P17544 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.08■□□□□ 0.32
ATF7P17544 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.08■□□□□ 0.32
ATF7P17544 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.08■□□□□ 0.32
ATF7P17544 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 AC000095.1-201ENST00000603208 874 ntBASIC17.08■□□□□ 0.32
ATF7P17544 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.08■□□□□ 0.32
ATF7P17544 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.08■□□□□ 0.32
ATF7P17544 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.08■□□□□ 0.32
ATF7P17544 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.08■□□□□ 0.32
ATF7P17544 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
ATF7P17544 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ATF7P17544 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
ATF7P17544 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.08■□□□□ 0.32
ATF7P17544 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATF7P17544 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.08■□□□□ 0.32
ATF7P17544 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATF7P17544 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.07■□□□□ 0.32
ATF7P17544 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.07■□□□□ 0.32
ATF7P17544 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.07■□□□□ 0.32
ATF7P17544 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.07■□□□□ 0.32
ATF7P17544 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 AC120045.2-201ENST00000567334 178 ntBASIC17.07■□□□□ 0.32
ATF7P17544 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.07■□□□□ 0.32
ATF7P17544 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ATF7P17544 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.07■□□□□ 0.32
ATF7P17544 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATF7P17544 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.07■□□□□ 0.32
ATF7P17544 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.07■□□□□ 0.32
ATF7P17544 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ATF7P17544 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATF7P17544 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATF7P17544 AL121723.1-201ENST00000445194 1519 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms