Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.1■□□□□ 0.33
SMPD1P17405 AP001002.3-201ENST00000623482 206 ntBASIC17.1■□□□□ 0.33
SMPD1P17405 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMPD1P17405 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMPD1P17405 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.1■□□□□ 0.33
SMPD1P17405 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.1■□□□□ 0.33
SMPD1P17405 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMPD1P17405 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SMPD1P17405 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.1■□□□□ 0.33
SMPD1P17405 AC055811.4-201ENST00000624039 1754 ntBASIC17.1■□□□□ 0.33
SMPD1P17405 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMPD1P17405 AL139384.1-201ENST00000612143 3047 ntBASIC17.1■□□□□ 0.33
SMPD1P17405 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.09■□□□□ 0.33
SMPD1P17405 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SMPD1P17405 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SMPD1P17405 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.09■□□□□ 0.33
SMPD1P17405 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.09■□□□□ 0.33
SMPD1P17405 AC016700.1-201ENST00000429424 312 ntBASIC17.09■□□□□ 0.33
SMPD1P17405 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.09■□□□□ 0.33
SMPD1P17405 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.09■□□□□ 0.33
SMPD1P17405 AC100850.1-201ENST00000506768 649 ntBASIC17.09■□□□□ 0.33
SMPD1P17405 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 NIFKP4-201ENST00000567275 1192 ntBASIC17.09■□□□□ 0.33
SMPD1P17405 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.09■□□□□ 0.33
SMPD1P17405 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SMPD1P17405 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SMPD1P17405 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.09■□□□□ 0.33
SMPD1P17405 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.09■□□□□ 0.33
SMPD1P17405 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.09■□□□□ 0.33
SMPD1P17405 CLUHP2-201ENST00000426660 1303 ntBASIC17.09■□□□□ 0.33
SMPD1P17405 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.09■□□□□ 0.33
SMPD1P17405 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.09■□□□□ 0.33
SMPD1P17405 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SMPD1P17405 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.09■□□□□ 0.33
SMPD1P17405 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SMPD1P17405 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SMPD1P17405 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMPD1P17405 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMPD1P17405 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 CICP13-201ENST00000422015 2789 ntBASIC17.08■□□□□ 0.33
SMPD1P17405 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SMPD1P17405 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.08■□□□□ 0.33
SMPD1P17405 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.08■□□□□ 0.33
SMPD1P17405 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMPD1P17405 REXO1L5P-201ENST00000622260 2098 ntBASIC17.08■□□□□ 0.33
SMPD1P17405 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.08■□□□□ 0.33
SMPD1P17405 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SMPD1P17405 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
SMPD1P17405 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.08■□□□□ 0.32
SMPD1P17405 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 AL662890.1-201ENST00000396818 632 ntBASIC17.08■□□□□ 0.32
SMPD1P17405 AC092506.1-202ENST00000401022 528 ntBASIC17.08■□□□□ 0.32
SMPD1P17405 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.08■□□□□ 0.32
SMPD1P17405 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.08■□□□□ 0.32
SMPD1P17405 SERPINA13P-202ENST00000478994 924 ntBASIC17.08■□□□□ 0.32
SMPD1P17405 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.08■□□□□ 0.32
SMPD1P17405 AC105129.2-201ENST00000559536 390 ntBASIC17.08■□□□□ 0.32
SMPD1P17405 NDUFV2P1-201ENST00000596415 907 ntBASIC17.08■□□□□ 0.32
SMPD1P17405 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.08■□□□□ 0.32
SMPD1P17405 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 AL603764.1-201ENST00000636452 321 ntBASIC17.08■□□□□ 0.32
SMPD1P17405 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SMPD1P17405 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.08■□□□□ 0.32
SMPD1P17405 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMPD1P17405 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms