Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
NCK1P16333 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NCK1P16333 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.75□□□□□ -0.05
NCK1P16333 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.75□□□□□ -0.05
NCK1P16333 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.75□□□□□ -0.05
NCK1P16333 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.75□□□□□ -0.05
NCK1P16333 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NCK1P16333 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
NCK1P16333 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
NCK1P16333 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.75□□□□□ -0.05
NCK1P16333 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.75□□□□□ -0.05
NCK1P16333 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.75□□□□□ -0.05
NCK1P16333 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.75□□□□□ -0.05
NCK1P16333 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.75□□□□□ -0.05
NCK1P16333 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
NCK1P16333 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.75□□□□□ -0.05
NCK1P16333 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.75□□□□□ -0.05
NCK1P16333 AC099522.2-201ENST00000607001 744 ntBASIC14.75□□□□□ -0.05
NCK1P16333 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.75□□□□□ -0.05
NCK1P16333 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.75□□□□□ -0.05
NCK1P16333 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.75□□□□□ -0.05
NCK1P16333 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.75□□□□□ -0.05
NCK1P16333 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NCK1P16333 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.74□□□□□ -0.05
NCK1P16333 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
NCK1P16333 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.74□□□□□ -0.05
NCK1P16333 WASH3P-207ENST00000560956 1394 ntBASIC14.74□□□□□ -0.05
NCK1P16333 BX640514.1-201ENST00000583223 1918 ntBASIC14.74□□□□□ -0.05
NCK1P16333 FO538757.1-201ENST00000623083 1397 ntBASIC14.74□□□□□ -0.05
NCK1P16333 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.74□□□□□ -0.05
NCK1P16333 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.74□□□□□ -0.05
NCK1P16333 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NCK1P16333 MIR1224-201ENST00000408193 85 ntBASIC14.74□□□□□ -0.05
NCK1P16333 FAM8A3P-201ENST00000427218 844 ntBASIC14.74□□□□□ -0.05
NCK1P16333 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.74□□□□□ -0.05
NCK1P16333 KRT18P2-201ENST00000447938 1258 ntBASIC14.74□□□□□ -0.05
NCK1P16333 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.74□□□□□ -0.05
NCK1P16333 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NCK1P16333 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.74□□□□□ -0.05
NCK1P16333 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.74□□□□□ -0.05
NCK1P16333 AP002472.1-201ENST00000577490 586 ntBASIC14.74□□□□□ -0.05
NCK1P16333 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.74□□□□□ -0.05
NCK1P16333 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.74□□□□□ -0.05
NCK1P16333 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.74□□□□□ -0.05
NCK1P16333 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.74□□□□□ -0.05
NCK1P16333 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NCK1P16333 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NCK1P16333 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 AC006504.5-208ENST00000588784 2401 ntBASIC14.74□□□□□ -0.05
NCK1P16333 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
NCK1P16333 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
NCK1P16333 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
NCK1P16333 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.74□□□□□ -0.05
NCK1P16333 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.74□□□□□ -0.05
NCK1P16333 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NCK1P16333 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms