Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC26.48■■□□□ 1.83
TOP2AP11388 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC26.48■■□□□ 1.83
TOP2AP11388 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
TOP2AP11388 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
TOP2AP11388 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TOP2AP11388 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TOP2AP11388 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TOP2AP11388 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
TOP2AP11388 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC26.47■■□□□ 1.83
TOP2AP11388 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC26.47■■□□□ 1.83
TOP2AP11388 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
TOP2AP11388 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TOP2AP11388 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC26.47■■□□□ 1.83
TOP2AP11388 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TOP2AP11388 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TOP2AP11388 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
TOP2AP11388 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TOP2AP11388 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TOP2AP11388 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC26.47■■□□□ 1.83
TOP2AP11388 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TOP2AP11388 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC26.47■■□□□ 1.83
TOP2AP11388 AC026316.1-201ENST00000398900 414 ntBASIC26.47■■□□□ 1.83
TOP2AP11388 TLE1P1-201ENST00000422965 589 ntBASIC26.47■■□□□ 1.83
TOP2AP11388 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC26.47■■□□□ 1.83
TOP2AP11388 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC26.47■■□□□ 1.83
TOP2AP11388 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC26.47■■□□□ 1.83
TOP2AP11388 IGLV3-15-201ENST00000518356 244 ntBASIC26.47■■□□□ 1.83
TOP2AP11388 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
TOP2AP11388 MIR3147-201ENST00000577811 66 ntBASIC26.47■■□□□ 1.83
TOP2AP11388 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC26.47■■□□□ 1.83
TOP2AP11388 WDR7-208ENST00000589935 544 ntTSL 4 BASIC26.47■■□□□ 1.83
TOP2AP11388 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC26.47■■□□□ 1.83
TOP2AP11388 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC26.47■■□□□ 1.83
TOP2AP11388 RN7SL736P-201ENST00000613111 269 ntBASIC26.47■■□□□ 1.83
TOP2AP11388 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TOP2AP11388 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
TOP2AP11388 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC26.47■■□□□ 1.83
TOP2AP11388 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TOP2AP11388 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TOP2AP11388 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TOP2AP11388 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TOP2AP11388 AC012441.2-201ENST00000444843 739 ntBASIC26.46■■□□□ 1.83
TOP2AP11388 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC26.46■■□□□ 1.83
TOP2AP11388 AC008825.2-201ENST00000603374 718 ntBASIC26.46■■□□□ 1.83
TOP2AP11388 MIR6720-201ENST00000611664 98 ntBASIC26.46■■□□□ 1.83
TOP2AP11388 AL353726.2-201ENST00000623259 884 ntBASIC26.46■■□□□ 1.83
TOP2AP11388 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC26.46■■□□□ 1.83
TOP2AP11388 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TOP2AP11388 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC26.46■■□□□ 1.83
TOP2AP11388 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TOP2AP11388 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TOP2AP11388 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC26.46■■□□□ 1.83
TOP2AP11388 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
TOP2AP11388 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TOP2AP11388 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TOP2AP11388 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC26.46■■□□□ 1.83
TOP2AP11388 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC26.46■■□□□ 1.83
TOP2AP11388 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC26.45■■□□□ 1.83
TOP2AP11388 AL627389.1-201ENST00000413508 1182 ntBASIC26.45■■□□□ 1.83
TOP2AP11388 SCARNA21-201ENST00000517026 139 ntBASIC26.45■■□□□ 1.83
TOP2AP11388 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC26.45■■□□□ 1.83
TOP2AP11388 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC26.45■■□□□ 1.83
TOP2AP11388 FZD10-202ENST00000539839 3282 ntBASIC26.45■■□□□ 1.83
TOP2AP11388 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC26.45■■□□□ 1.83
TOP2AP11388 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
TOP2AP11388 TBC1D3J-201ENST00000620719 1426 ntBASIC26.45■■□□□ 1.82
TOP2AP11388 AC012508.2-201ENST00000567613 1472 ntBASIC26.45■■□□□ 1.82
TOP2AP11388 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC26.45■■□□□ 1.82
TOP2AP11388 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC26.45■■□□□ 1.82
TOP2AP11388 CICP11-201ENST00000434745 2827 ntBASIC26.45■■□□□ 1.82
TOP2AP11388 API5-202ENST00000420461 2009 ntTSL 2 BASIC26.45■■□□□ 1.82
TOP2AP11388 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC26.45■■□□□ 1.82
TOP2AP11388 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.82
TOP2AP11388 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.82
TOP2AP11388 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
TOP2AP11388 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TOP2AP11388 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC26.44■■□□□ 1.82
TOP2AP11388 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC26.44■■□□□ 1.82
TOP2AP11388 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TOP2AP11388 RN7SL67P-201ENST00000492147 296 ntBASIC26.44■■□□□ 1.82
TOP2AP11388 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC26.44■■□□□ 1.82
TOP2AP11388 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC26.44■■□□□ 1.82
TOP2AP11388 AC010491.1-201ENST00000563101 2797 ntBASIC26.44■■□□□ 1.82
TOP2AP11388 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC26.44■■□□□ 1.82
TOP2AP11388 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
TOP2AP11388 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC26.44■■□□□ 1.82
TOP2AP11388 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TOP2AP11388 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TOP2AP11388 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC26.44■■□□□ 1.82
TOP2AP11388 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
TOP2AP11388 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TOP2AP11388 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TOP2AP11388 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TOP2AP11388 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TOP2AP11388 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC26.44■■□□□ 1.82
TOP2AP11388 OR2K2-202ENST00000374428 1038 ntBASIC26.44■■□□□ 1.82
TOP2AP11388 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC26.44■■□□□ 1.82
TOP2AP11388 AL355334.1-201ENST00000417713 215 ntBASIC26.44■■□□□ 1.82
TOP2AP11388 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC26.44■■□□□ 1.82
TOP2AP11388 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms