Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.71□□□□□ -0.21
UBCP0CG48 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
UBCP0CG48 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.71□□□□□ -0.21
UBCP0CG48 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 AL353705.2-201ENST00000428243 662 ntBASIC13.71□□□□□ -0.21
UBCP0CG48 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.71□□□□□ -0.21
UBCP0CG48 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.71□□□□□ -0.21
UBCP0CG48 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
UBCP0CG48 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
UBCP0CG48 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.71□□□□□ -0.21
UBCP0CG48 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBCP0CG48 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBCP0CG48 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBCP0CG48 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UBCP0CG48 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBCP0CG48 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
UBCP0CG48 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBCP0CG48 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
UBCP0CG48 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
UBCP0CG48 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBCP0CG48 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.71□□□□□ -0.22
UBCP0CG48 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
UBCP0CG48 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBCP0CG48 CICP23-201ENST00000605013 2741 ntBASIC13.7□□□□□ -0.22
UBCP0CG48 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.7□□□□□ -0.22
UBCP0CG48 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.7□□□□□ -0.22
UBCP0CG48 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 AZGP1P1-201ENST00000411909 902 ntBASIC13.7□□□□□ -0.22
UBCP0CG48 AC023274.1-201ENST00000418278 595 ntBASIC13.7□□□□□ -0.22
UBCP0CG48 MCCD1P2-201ENST00000423228 335 ntBASIC13.7□□□□□ -0.22
UBCP0CG48 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.7□□□□□ -0.22
UBCP0CG48 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.7□□□□□ -0.22
UBCP0CG48 SLC25A39P2-201ENST00000537614 270 ntBASIC13.7□□□□□ -0.22
UBCP0CG48 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.7□□□□□ -0.22
UBCP0CG48 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.7□□□□□ -0.22
UBCP0CG48 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.7□□□□□ -0.22
UBCP0CG48 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.7□□□□□ -0.22
UBCP0CG48 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.7□□□□□ -0.22
UBCP0CG48 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.7□□□□□ -0.22
UBCP0CG48 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 AC126335.2-201ENST00000623362 4637 ntBASIC13.7□□□□□ -0.22
UBCP0CG48 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UBCP0CG48 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
UBCP0CG48 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.7□□□□□ -0.22
UBCP0CG48 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.7□□□□□ -0.22
UBCP0CG48 AL607033.1-201ENST00000623900 1599 ntBASIC13.7□□□□□ -0.22
UBCP0CG48 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBCP0CG48 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UBCP0CG48 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.69□□□□□ -0.22
UBCP0CG48 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
UBCP0CG48 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms