Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.54□□□□□ -0.24
CSF1P09603 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.54□□□□□ -0.24
CSF1P09603 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.54□□□□□ -0.24
CSF1P09603 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CSF1P09603 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.54□□□□□ -0.24
CSF1P09603 RNU1-129P-201ENST00000384064 167 ntBASIC13.54□□□□□ -0.24
CSF1P09603 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.54□□□□□ -0.24
CSF1P09603 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.54□□□□□ -0.24
CSF1P09603 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.54□□□□□ -0.24
CSF1P09603 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
CSF1P09603 HTR5BP-201ENST00000430851 1154 ntBASIC13.54□□□□□ -0.24
CSF1P09603 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.54□□□□□ -0.24
CSF1P09603 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 AC108073.2-201ENST00000464002 357 ntBASIC13.54□□□□□ -0.24
CSF1P09603 CYMP-203ENST00000474680 1263 ntBASIC13.54□□□□□ -0.24
CSF1P09603 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.54□□□□□ -0.24
CSF1P09603 AC018845.2-201ENST00000568326 409 ntBASIC13.54□□□□□ -0.24
CSF1P09603 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.54□□□□□ -0.24
CSF1P09603 U1.21-201ENST00000580816 167 ntBASIC13.54□□□□□ -0.24
CSF1P09603 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.54□□□□□ -0.24
CSF1P09603 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.54□□□□□ -0.24
CSF1P09603 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CSF1P09603 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.54□□□□□ -0.24
CSF1P09603 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.54□□□□□ -0.24
CSF1P09603 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSF1P09603 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.54□□□□□ -0.24
CSF1P09603 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.53□□□□□ -0.24
CSF1P09603 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.53□□□□□ -0.24
CSF1P09603 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CSF1P09603 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CSF1P09603 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.53□□□□□ -0.24
CSF1P09603 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.53□□□□□ -0.24
CSF1P09603 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 PMS2P4-201ENST00000412466 1052 ntBASIC13.53□□□□□ -0.24
CSF1P09603 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.53□□□□□ -0.24
CSF1P09603 MKNK2P1-201ENST00000437526 628 ntBASIC13.53□□□□□ -0.24
CSF1P09603 PRSS29P-201ENST00000440800 595 ntBASIC13.53□□□□□ -0.24
CSF1P09603 CEND1P1-201ENST00000451006 455 ntBASIC13.53□□□□□ -0.24
CSF1P09603 RPS15P9-201ENST00000494093 319 ntBASIC13.53□□□□□ -0.24
CSF1P09603 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.53□□□□□ -0.24
CSF1P09603 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.53□□□□□ -0.24
CSF1P09603 RFPL4AP1-201ENST00000530883 850 ntBASIC13.53□□□□□ -0.24
CSF1P09603 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.53□□□□□ -0.24
CSF1P09603 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.53□□□□□ -0.24
CSF1P09603 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.53□□□□□ -0.24
CSF1P09603 AP002472.1-201ENST00000577490 586 ntBASIC13.53□□□□□ -0.24
CSF1P09603 MIR3197-201ENST00000582241 73 ntBASIC13.53□□□□□ -0.24
CSF1P09603 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.53□□□□□ -0.24
CSF1P09603 AL031055.1-201ENST00000606362 631 ntBASIC13.53□□□□□ -0.24
CSF1P09603 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.53□□□□□ -0.24
CSF1P09603 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.53□□□□□ -0.24
CSF1P09603 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSF1P09603 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.53□□□□□ -0.24
CSF1P09603 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms