Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
ERCC1P07992 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 FAM45BP-202ENST00000592932 1624 ntBASIC13.87□□□□□ -0.19
ERCC1P07992 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.87□□□□□ -0.19
ERCC1P07992 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
ERCC1P07992 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.87□□□□□ -0.19
ERCC1P07992 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 AC097493.3-201ENST00000509725 367 ntBASIC13.87□□□□□ -0.19
ERCC1P07992 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.87□□□□□ -0.19
ERCC1P07992 AC243562.2-201ENST00000561247 970 ntBASIC13.87□□□□□ -0.19
ERCC1P07992 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.87□□□□□ -0.19
ERCC1P07992 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.87□□□□□ -0.19
ERCC1P07992 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 AL589739.1-201ENST00000607720 493 ntBASIC13.87□□□□□ -0.19
ERCC1P07992 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.87□□□□□ -0.19
ERCC1P07992 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.87□□□□□ -0.19
ERCC1P07992 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.87□□□□□ -0.19
ERCC1P07992 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.87□□□□□ -0.19
ERCC1P07992 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
ERCC1P07992 AC105250.1-201ENST00000509378 2057 ntBASIC13.87□□□□□ -0.19
ERCC1P07992 AL009178.2-201ENST00000597278 2719 ntBASIC13.87□□□□□ -0.19
ERCC1P07992 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ERCC1P07992 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
ERCC1P07992 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ERCC1P07992 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.86□□□□□ -0.19
ERCC1P07992 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.86□□□□□ -0.19
ERCC1P07992 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.86□□□□□ -0.19
ERCC1P07992 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.86□□□□□ -0.19
ERCC1P07992 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.86□□□□□ -0.19
ERCC1P07992 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.86□□□□□ -0.19
ERCC1P07992 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 FAM207CP-201ENST00000443486 507 ntBASIC13.86□□□□□ -0.19
ERCC1P07992 SERBP1P3-201ENST00000459980 809 ntBASIC13.86□□□□□ -0.19
ERCC1P07992 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.86□□□□□ -0.19
ERCC1P07992 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.86□□□□□ -0.19
ERCC1P07992 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms