Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.68■□□□□ 0.1
RETP07949 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.68■□□□□ 0.1
RETP07949 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.68■□□□□ 0.1
RETP07949 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RETP07949 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RETP07949 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.68■□□□□ 0.1
RETP07949 AC004987.2-201ENST00000395959 1148 ntBASIC15.68■□□□□ 0.1
RETP07949 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.68■□□□□ 0.1
RETP07949 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.68■□□□□ 0.1
RETP07949 AC007969.1-201ENST00000433675 447 ntBASIC15.68■□□□□ 0.1
RETP07949 BX284668.4-201ENST00000453917 508 ntBASIC15.68■□□□□ 0.1
RETP07949 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.68■□□□□ 0.1
RETP07949 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
RETP07949 MIR4722-201ENST00000578292 60 ntBASIC15.68■□□□□ 0.1
RETP07949 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.68■□□□□ 0.1
RETP07949 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.68■□□□□ 0.1
RETP07949 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.68■□□□□ 0.1
RETP07949 AC005252.2-201ENST00000624630 1141 ntBASIC15.68■□□□□ 0.1
RETP07949 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.68■□□□□ 0.1
RETP07949 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.68■□□□□ 0.1
RETP07949 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RETP07949 AC010491.1-201ENST00000563101 2797 ntBASIC15.68■□□□□ 0.1
RETP07949 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.68■□□□□ 0.1
RETP07949 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.67■□□□□ 0.1
RETP07949 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.67■□□□□ 0.1
RETP07949 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RETP07949 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 ACKR1-201ENST00000368121 1240 ntBASIC15.67■□□□□ 0.1
RETP07949 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 FNTAP2-201ENST00000430308 634 ntBASIC15.67■□□□□ 0.1
RETP07949 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 VDAC1P7-201ENST00000462417 847 ntBASIC15.67■□□□□ 0.1
RETP07949 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.67■□□□□ 0.1
RETP07949 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RETP07949 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
RETP07949 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 AL031731.1-201ENST00000642131 2094 ntBASIC15.67■□□□□ 0.1
RETP07949 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.67■□□□□ 0.1
RETP07949 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.67■□□□□ 0.1
RETP07949 C8orf49-201ENST00000525043 1968 ntBASIC15.67■□□□□ 0.1
RETP07949 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RETP07949 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 KRT8P37-201ENST00000451609 1420 ntBASIC15.67■□□□□ 0.1
RETP07949 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.67■□□□□ 0.1
RETP07949 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
RETP07949 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.67■□□□□ 0.1
RETP07949 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RETP07949 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.66■□□□□ 0.1
RETP07949 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms