Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 MEP1AP4-201ENST00000423244 1087 ntBASIC15.74■□□□□ 0.11
HLA-DQB2P05538 GHSR-202ENST00000427970 912 ntBASIC15.74■□□□□ 0.11
HLA-DQB2P05538 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 MIR4745-201ENST00000577608 62 ntBASIC15.74■□□□□ 0.11
HLA-DQB2P05538 AC004233.3-201ENST00000607794 1269 ntBASIC15.74■□□□□ 0.11
HLA-DQB2P05538 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 MIR8072-201ENST00000614241 80 ntBASIC15.74■□□□□ 0.11
HLA-DQB2P05538 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HLA-DQB2P05538 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 AL049840.4-201ENST00000602422 811 ntBASIC15.73■□□□□ 0.11
HLA-DQB2P05538 AC099568.2-201ENST00000609194 695 ntBASIC15.73■□□□□ 0.11
HLA-DQB2P05538 AL662799.1-202ENST00000614205 422 ntBASIC15.73■□□□□ 0.11
HLA-DQB2P05538 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 TCAF2P1-201ENST00000291129 2421 ntBASIC15.73■□□□□ 0.11
HLA-DQB2P05538 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HLA-DQB2P05538 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 AC007541.1-201ENST00000570282 1469 ntBASIC15.72■□□□□ 0.11
HLA-DQB2P05538 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 DFFBP1-201ENST00000433250 979 ntBASIC15.72■□□□□ 0.11
HLA-DQB2P05538 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 GAPDHP40-201ENST00000505218 1006 ntBASIC15.72■□□□□ 0.11
HLA-DQB2P05538 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 RRP7BP-205ENST00000566851 833 ntBASIC15.72■□□□□ 0.11
HLA-DQB2P05538 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DQB2P05538 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms