Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGN1P05114 RPL13AP23-201ENST00000480739 586 ntBASIC14.15□□□□□ -0.14
HMGN1P05114 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.15□□□□□ -0.14
HMGN1P05114 IGHV3-62-201ENST00000520057 340 ntBASIC14.15□□□□□ -0.14
HMGN1P05114 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGN1P05114 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.15□□□□□ -0.14
HMGN1P05114 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.15□□□□□ -0.14
HMGN1P05114 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.15□□□□□ -0.14
HMGN1P05114 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HMGN1P05114 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.15□□□□□ -0.14
HMGN1P05114 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HMGN1P05114 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGN1P05114 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HMGN1P05114 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGN1P05114 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.15
HMGN1P05114 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HMGN1P05114 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
HMGN1P05114 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
HMGN1P05114 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGN1P05114 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGN1P05114 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 AC007191.1-201ENST00000623179 2995 ntBASIC14.14□□□□□ -0.15
HMGN1P05114 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGN1P05114 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGN1P05114 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HMGN1P05114 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HMGN1P05114 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.14□□□□□ -0.15
HMGN1P05114 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGN1P05114 AC092865.6-201ENST00000642101 219 ntBASIC14.14□□□□□ -0.15
HMGN1P05114 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 GRK6P1-201ENST00000400595 1711 ntBASIC14.14□□□□□ -0.15
HMGN1P05114 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGN1P05114 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HMGN1P05114 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
HMGN1P05114 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMGN1P05114 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 AC084364.1-201ENST00000551967 1556 ntBASIC14.13□□□□□ -0.15
HMGN1P05114 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.13□□□□□ -0.15
HMGN1P05114 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.13□□□□□ -0.15
HMGN1P05114 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.13□□□□□ -0.15
HMGN1P05114 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms