Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.58■□□□□ 0.56
CHGBP05060 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.58■□□□□ 0.56
CHGBP05060 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.58■□□□□ 0.56
CHGBP05060 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.58■□□□□ 0.56
CHGBP05060 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.58■□□□□ 0.56
CHGBP05060 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.58■□□□□ 0.56
CHGBP05060 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHGBP05060 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHGBP05060 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHGBP05060 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.58■□□□□ 0.56
CHGBP05060 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CHGBP05060 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CHGBP05060 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHGBP05060 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CHGBP05060 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHGBP05060 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHGBP05060 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.57■□□□□ 0.56
CHGBP05060 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.57■□□□□ 0.56
CHGBP05060 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.57■□□□□ 0.56
CHGBP05060 AC006486.2-201ENST00000624246 2199 ntBASIC18.57■□□□□ 0.56
CHGBP05060 AC007787.1-201ENST00000588095 1583 ntBASIC18.57■□□□□ 0.56
CHGBP05060 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 SOCS2P1-201ENST00000417727 557 ntBASIC18.57■□□□□ 0.56
CHGBP05060 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.57■□□□□ 0.56
CHGBP05060 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.57■□□□□ 0.56
CHGBP05060 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CHGBP05060 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.57■□□□□ 0.56
CHGBP05060 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 CR383656.12-201ENST00000549567 513 ntBASIC18.57■□□□□ 0.56
CHGBP05060 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.57■□□□□ 0.56
CHGBP05060 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHGBP05060 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.57■□□□□ 0.56
CHGBP05060 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 REXO1L5P-201ENST00000622260 2098 ntBASIC18.57■□□□□ 0.56
CHGBP05060 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CHGBP05060 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CHGBP05060 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CHGBP05060 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHGBP05060 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 REXO1L4P-201ENST00000605109 1937 ntBASIC18.57■□□□□ 0.56
CHGBP05060 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHGBP05060 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.56■□□□□ 0.56
CHGBP05060 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 RNU1-114P-201ENST00000365297 166 ntBASIC18.56■□□□□ 0.56
CHGBP05060 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.56■□□□□ 0.56
CHGBP05060 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.56■□□□□ 0.56
CHGBP05060 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 AC106760.1-201ENST00000508690 800 ntBASIC18.56■□□□□ 0.56
CHGBP05060 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.56■□□□□ 0.56
CHGBP05060 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.56■□□□□ 0.56
CHGBP05060 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.56■□□□□ 0.56
CHGBP05060 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 AC239800.4-201ENST00000603712 296 ntBASIC18.56■□□□□ 0.56
CHGBP05060 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.56■□□□□ 0.56
CHGBP05060 AL358472.5-202ENST00000641448 1267 ntBASIC18.56■□□□□ 0.56
CHGBP05060 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.56■□□□□ 0.56
CHGBP05060 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 LINC00528-201ENST00000600723 2160 ntBASIC18.56■□□□□ 0.56
CHGBP05060 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHGBP05060 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.56■□□□□ 0.56
CHGBP05060 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.56■□□□□ 0.56
CHGBP05060 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHGBP05060 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms