Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 CNN2P11-201ENST00000429351 262 ntBASIC14.25□□□□□ -0.13
HIST1H2ABP04908 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 SPDYE14P-201ENST00000442619 822 ntBASIC14.25□□□□□ -0.13
HIST1H2ABP04908 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 AL109954.1-202ENST00000564051 2148 ntBASIC14.25□□□□□ -0.13
HIST1H2ABP04908 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 AP001059.3-201ENST00000619053 235 ntBASIC14.25□□□□□ -0.13
HIST1H2ABP04908 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2ABP04908 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 AC138035.3-201ENST00000622706 2791 ntBASIC14.24□□□□□ -0.13
HIST1H2ABP04908 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 GPS2P2-201ENST00000430745 888 ntBASIC14.24□□□□□ -0.13
HIST1H2ABP04908 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 HNRNPUP1-201ENST00000554987 333 ntBASIC14.24□□□□□ -0.13
HIST1H2ABP04908 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.24□□□□□ -0.13
HIST1H2ABP04908 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2ABP04908 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms