Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.79■□□□□ 0.44
COL2A1P02458 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.79■□□□□ 0.44
COL2A1P02458 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.79■□□□□ 0.44
COL2A1P02458 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.79■□□□□ 0.44
COL2A1P02458 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.79■□□□□ 0.44
COL2A1P02458 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 DPM3-202ENST00000368399 517 ntBASIC17.79■□□□□ 0.44
COL2A1P02458 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.79■□□□□ 0.44
COL2A1P02458 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
COL2A1P02458 AC106794.1-201ENST00000506935 792 ntBASIC17.79■□□□□ 0.44
COL2A1P02458 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.79■□□□□ 0.44
COL2A1P02458 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.79■□□□□ 0.44
COL2A1P02458 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
COL2A1P02458 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.79■□□□□ 0.44
COL2A1P02458 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
COL2A1P02458 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COL2A1P02458 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.79■□□□□ 0.44
COL2A1P02458 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.79■□□□□ 0.44
COL2A1P02458 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 AC009093.2-202ENST00000620513 2079 ntBASIC17.79■□□□□ 0.44
COL2A1P02458 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 SHC1P1-201ENST00000425230 1745 ntBASIC17.79■□□□□ 0.44
COL2A1P02458 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
COL2A1P02458 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL2A1P02458 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
COL2A1P02458 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COL2A1P02458 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COL2A1P02458 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COL2A1P02458 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.78■□□□□ 0.44
COL2A1P02458 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.78■□□□□ 0.44
COL2A1P02458 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.78■□□□□ 0.44
COL2A1P02458 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 AL662890.1-201ENST00000396818 632 ntBASIC17.78■□□□□ 0.44
COL2A1P02458 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.78■□□□□ 0.44
COL2A1P02458 AL008707.1-201ENST00000422498 534 ntBASIC17.78■□□□□ 0.44
COL2A1P02458 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.78■□□□□ 0.44
COL2A1P02458 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.78■□□□□ 0.44
COL2A1P02458 EIF4HP1-201ENST00000453115 687 ntBASIC17.78■□□□□ 0.44
COL2A1P02458 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COL2A1P02458 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.78■□□□□ 0.44
COL2A1P02458 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.78■□□□□ 0.44
COL2A1P02458 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.78■□□□□ 0.44
COL2A1P02458 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.78■□□□□ 0.44
COL2A1P02458 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 AC091812.3-201ENST00000621362 345 ntBASIC17.78■□□□□ 0.44
COL2A1P02458 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.78■□□□□ 0.44
COL2A1P02458 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.78■□□□□ 0.44
COL2A1P02458 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.78■□□□□ 0.44
COL2A1P02458 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COL2A1P02458 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COL2A1P02458 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COL2A1P02458 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL2A1P02458 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.78■□□□□ 0.44
COL2A1P02458 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COL2A1P02458 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL2A1P02458 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
COL2A1P02458 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
COL2A1P02458 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
COL2A1P02458 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.77■□□□□ 0.44
COL2A1P02458 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL2A1P02458 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.77■□□□□ 0.44
COL2A1P02458 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.77■□□□□ 0.44
COL2A1P02458 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL2A1P02458 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL2A1P02458 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL2A1P02458 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.77■□□□□ 0.44
COL2A1P02458 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL2A1P02458 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.77■□□□□ 0.44
COL2A1P02458 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
COL2A1P02458 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL2A1P02458 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.77■□□□□ 0.44
COL2A1P02458 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.77■□□□□ 0.44
COL2A1P02458 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.77■□□□□ 0.44
COL2A1P02458 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL2A1P02458 TUBB8P8-201ENST00000458717 1058 ntBASIC17.77■□□□□ 0.44
COL2A1P02458 MARK2P5-201ENST00000507649 634 ntBASIC17.77■□□□□ 0.44
COL2A1P02458 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.77■□□□□ 0.44
COL2A1P02458 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.77■□□□□ 0.44
COL2A1P02458 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.77■□□□□ 0.44
COL2A1P02458 AL136301.1-201ENST00000615830 422 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms