Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
COL1A1P02452 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.42■□□□□ 0.54
COL1A1P02452 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.42■□□□□ 0.54
COL1A1P02452 POM121L10P-201ENST00000436994 1285 ntBASIC18.42■□□□□ 0.54
COL1A1P02452 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.42■□□□□ 0.54
COL1A1P02452 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 AC022616.1-201ENST00000518688 554 ntBASIC18.42■□□□□ 0.54
COL1A1P02452 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.42■□□□□ 0.54
COL1A1P02452 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.42■□□□□ 0.54
COL1A1P02452 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.42■□□□□ 0.54
COL1A1P02452 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.42■□□□□ 0.54
COL1A1P02452 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COL1A1P02452 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.42■□□□□ 0.54
COL1A1P02452 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL1A1P02452 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.42■□□□□ 0.54
COL1A1P02452 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
COL1A1P02452 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.41■□□□□ 0.54
COL1A1P02452 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
COL1A1P02452 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.41■□□□□ 0.54
COL1A1P02452 AC079178.1-201ENST00000420915 656 ntBASIC18.41■□□□□ 0.54
COL1A1P02452 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.41■□□□□ 0.54
COL1A1P02452 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.41■□□□□ 0.54
COL1A1P02452 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.41■□□□□ 0.54
COL1A1P02452 PPY2P-201ENST00000582808 702 ntBASIC18.41■□□□□ 0.54
COL1A1P02452 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.41■□□□□ 0.54
COL1A1P02452 AC008894.3-201ENST00000624324 3103 ntBASIC18.41■□□□□ 0.54
COL1A1P02452 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.41■□□□□ 0.54
COL1A1P02452 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.41■□□□□ 0.54
COL1A1P02452 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
COL1A1P02452 AL360270.3-201ENST00000609118 1348 ntBASIC18.41■□□□□ 0.54
COL1A1P02452 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL1A1P02452 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.41■□□□□ 0.54
COL1A1P02452 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL1A1P02452 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL1A1P02452 TPM3P8-201ENST00000330554 643 ntBASIC18.4■□□□□ 0.54
COL1A1P02452 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.4■□□□□ 0.54
COL1A1P02452 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.4■□□□□ 0.54
COL1A1P02452 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC18.4■□□□□ 0.54
COL1A1P02452 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.4■□□□□ 0.54
COL1A1P02452 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 AC104982.3-201ENST00000581995 514 ntBASIC18.4■□□□□ 0.54
COL1A1P02452 RN7SL713P-201ENST00000582127 302 ntBASIC18.4■□□□□ 0.54
COL1A1P02452 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.4■□□□□ 0.54
COL1A1P02452 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.4■□□□□ 0.54
COL1A1P02452 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL1A1P02452 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 C18orf15-201ENST00000623680 2534 ntBASIC18.4■□□□□ 0.54
COL1A1P02452 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL1A1P02452 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.4■□□□□ 0.54
COL1A1P02452 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL1A1P02452 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL1A1P02452 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
COL1A1P02452 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.4■□□□□ 0.54
COL1A1P02452 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL1A1P02452 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.4■□□□□ 0.54
COL1A1P02452 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL1A1P02452 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL1A1P02452 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL1A1P02452 AL662890.1-201ENST00000396818 632 ntBASIC18.39■□□□□ 0.54
COL1A1P02452 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.39■□□□□ 0.54
COL1A1P02452 FAM8A4P-201ENST00000435433 1213 ntBASIC18.39■□□□□ 0.54
COL1A1P02452 HIST2H2BB-201ENST00000449108 381 ntBASIC18.39■□□□□ 0.54
COL1A1P02452 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COL1A1P02452 HIST2H2BC-201ENST00000498492 580 ntBASIC18.39■□□□□ 0.54
COL1A1P02452 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COL1A1P02452 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
COL1A1P02452 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.39■□□□□ 0.54
COL1A1P02452 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.39■□□□□ 0.54
COL1A1P02452 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.39■□□□□ 0.54
COL1A1P02452 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.39■□□□□ 0.54
COL1A1P02452 AC138466.3-201ENST00000619983 221 ntBASIC18.39■□□□□ 0.54
COL1A1P02452 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.39■□□□□ 0.54
COL1A1P02452 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.54
COL1A1P02452 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL1A1P02452 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
COL1A1P02452 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.39■□□□□ 0.54
COL1A1P02452 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms